Trematomus bernacchii (emerald rockcod): 117499102 Help Entry 117499102         CDS       T09643                                  Symbol trim25l Name (RefSeq) E3 ubiquitin/ISG15 ligase TRIM25   KO K10652   tripartite motif-containing protein 25 [EC:2.3.2.27] Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04622   RIG-I-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:tben00001]  09150 Organismal Systems   09151 Immune system    04622 RIG-I-like receptor signaling pathway     117499102 (trim25l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tben04121]     117499102 (trim25l) Enzymes [BR:tben01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117499102 (trim25l) Ubiquitin system [BR:tben04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRIM/RBCC proteins     117499102 (trim25l) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PRY zf-C3HC4_4 SPRY zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 zf-B_box zf-C3HC4_2 RING_XB3-XBAT31 zf-RING_2 ANCHR-like_BBOX zf-RING_5 HisKA Motif Other DBs NCBI-GeneID:  117499102 NCBI-ProteinID:  XP_034007289 LinkDB All DBs Position Unknown AA seq 817 aa AA seqDB search MSAKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMACIKDYWSKNDPKGVYSCPQCRKSFS PKPSLSRNTMLAEAVEQLRKGAQIADVRASMRSGTGFASSKTKRKLSSSAVLCDMCKGEQ RAAVKSCLVCMSSFCEAHLKPHKTKKSLSKHELIAPTSNLAEKICTEHKYLQEFFCRQCK MFVCWLCTSNQHKGHECVSTKVERLEKQKLMSEMQTENTQRLKEREQELKDMKKMMEVTK RSSDMVHDDTEQVLSELQRSVERLQELLEEVLDQASMQKMGQAQEVTDSLEAEVKELRKR DKEMKDLLRCEDHIYYLETYESLCNPLESGDLPTVVVNPEASFEPVRDAILDLRDKIEDI CNQELGKITKQVNDTTLFTLGDANRSGHKGGIFKLFSGLGSRNTNSRSPAPTVGAHADRR GLGIGLRNQDVRSRDTPRDKGNTSSPRPRDRQRREERETVRETNPRPSPTPSPTPSRKES QSLWSRSSQSQAAAPVQTPTRIPSTRTPTPAPTPTPTPTPTPAPSPAPAPAASNAGSGFS RMASISSLFRSHRRGTTAATPITQENNTNPWGMSALSETPTEINPGLFLDSPTNTMTQAP AFPGLREINLDSIQAPEPRTREEFLQYSMTFTLDANTAHRRLSLSEGNTKATLQGAAQPY PNTPQRFDGWTQVMCESPLYSQRCYWEVEWRGRGSSMGVAYKAMIRKGLDARSGLGYNAQ SWTLELSDTCCSAMHDNQKKDIPVTYSPRLGIYLDLSTGTLAFYSVAESMTHLHTFRANF TQPLYAVFGVGSGVGVGLDFALGQFSSSSDSIKICPM NT seq 2454 nt NT seq  +upstreamnt  +downstreamnt atgagtgccaaactgtggacagaggagcagtttaactgtcctgtgtgtctggatctccca aatgatccagtaaccatcccttgtgggcacagctactgcatggcctgcatcaaggactac tggagcaagaacgatcccaagggcgtctacagctgcccacaatgccgaaagtccttcagt cccaagccctccttgtcgagaaacaccatgctggctgaggctgtagagcagctccgcaaa ggggcccaaatagctgatgttcgtgcctctatgcgaagcggcactggctttgcctcatcc aaaaccaaaaggaaactctcttcctctgcagtgttatgcgacatgtgcaaaggagaacag cgagcagcggtcaagagctgcctggtgtgcatgagttcattctgcgaagcccacctgaag ccccacaagaccaagaagtccctgagtaagcacgagctgatagcacccacaagcaatctg gctgagaagatctgcacagagcacaaatacctgcaagagttcttctgtcgccagtgtaaa atgtttgtctgctggctgtgcaccagcaaccagcacaaaggccacgagtgtgtgtccacc aaggttgagcgtttggagaaacagaaattgatgtcagagatgcagacagagaatacgcag agactgaaggagagagagcaggagctgaaagacatgaagaagatgatggaggtgacgaag cgttcttcagacatggtccatgacgacactgagcaggtgctgtcggagctgcagcgttca gtggagcgtctgcaggagcttcttgaagaagttctggatcaggccagcatgcagaagatg ggccaagctcaggaagtcacagacagtctggaggcggaggtcaaagagctcaggaagaga gacaaggagatgaaggacttgttacgctgtgaggaccacatctactacctagagacatac gagtccttgtgtaatcccctggagtccggagaccttcccactgtggtggtaaatccagaa gcttcttttgaaccggtacgagatgccatcctagacctcagggacaaaattgaggatatt tgcaaccaggaattgggaaagatcaccaaacaagtcaatgatacaacgctgttcactctt ggagacgctaatcgctcaggacacaaaggagggatttttaaattgttttctggtcttggt tctcgtaacacaaacagtcgttcaccagcccctactgtgggagcccatgctgacagacga ggacttggtataggcctcagaaatcaagatgtgcggagtagagacacaccacgagacaaa ggaaacacgagttcaccgagacctcgggacagacagaggagagaggaaagagagacagtg agggagacgaaccccagacccagtcccactccgagcccaactcccagccgcaaagagtct caatctctttggagccggtccagtcagagccaggctgcagcaccggttcaaaccccgact cgaatcccatccacacgaactccaactccagctccaactccaactccaactccaactcca actccagctcctagtccagcacctgcacctgcagcatcaaacgcagggtcaggtttcagt cggatggcatcgatcagcagcctcttccgttcccatcgacgtggcacaaccgcggctacc ccaatcacccaggaaaataacacaaacccatgggggatgtctgctttgtccgaaacacca acagagattaacccaggtctttttctggactctccgaccaacaccatgactcaggctcct gctttccctggattgagagaaatcaacctggacagcatccaggcgccagagccaaggacc agagaggagttcctacagtactccatgaccttcaccctcgacgccaacacagcccatcgt cggctctctctttccgagggcaacactaaagccaccctgcagggggcagcgcagccgtac ccaaacacccctcagcgttttgacggatggacccaggtgatgtgcgagagccctctgtac tcccagcgatgttactgggaggtggagtggagaggaagaggatcctcgatgggcgtagct tacaaagcgatgattagaaaaggattggatgctcgttcggggctcggttacaacgcccag tcttggacgttggagctgtcggacacctgctgctcggccatgcatgacaaccagaagaaa gacatccccgtcacttattctcctcgtttggggatctatttggacctctccacggggacg ctggcgttctacagcgtggctgaaagtatgacgcaccttcatacattcagagctaacttc acacagccgctttacgccgtgttcggggtgggaagtggagtcggggtgggactggatttc gctcttggtcagtttagctccagctctgacagcattaagatctgtcccatgtga

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