Trematomus bernacchii (emerald rockcod): 117499163 Help Entry 117499163         CDS       T09643                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04382   Cornified envelope formation tben04510   Focal adhesion tben04512   ECM-receptor interaction tben04518   Integrin signaling tben04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tben00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117499163    04518 Integrin signaling     117499163  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     117499163   09142 Cell motility    04820 Cytoskeleton in muscle cells     117499163  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     117499163  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tben04147]     117499163    00536 Glycosaminoglycan binding proteins [BR:tben00536]     117499163 Exosome [BR:tben04147]  Exosomal proteins   Exosomal proteins of other cancer cells    117499163 Glycosaminoglycan binding proteins [BR:tben00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117499163 SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  117499163 NCBI-ProteinID:  XP_034007411 LinkDB All DBs Position Unknown AA seq 916 aa AA seqDB search GYPGPLGQQGPQGPPGFPGPQGPPGEKAQRGDEGPIGAAGLKGDSGNFGVPGFPGLEGVP GHPGPAGGPGFPGLDGCNGTRGERGDPGISGQQGTYGEPGFSGLKGFPGDPAVYYIQYPG ISGDVGPSGFTALSGEPGLSGLTGVLGPAGPDGTNGLPGLPGFRGSPGEKGRSLPGQKGD EGDQGLQGPPGPFEYVDPPEDLYLKGEKGDPGPKGICAVTGLPGLDALPGILGEKGIVGF PGPRGFYGNLGVPGESGFKGTRGIPGLPGLIGREGPKGLTGDPGPKGVPQDVEVTHTGDN GDPGALGPRGPPGDIGLMGMHGPPGAPGRSLSGPRGVVGERGSLGSRGDRGDPGLVYKDQ LTPGEPGKPGRLGPQGLKGEQGTPGTYCFEGAPGESGDPGDQGPQGSQGFQGFKGSSGGC DCGPPIVMKGLPGPEGDRGSPGYSGTSGAPGLRGEKGLPGDTGVRGEQGLGGFPGVVGFK GQKGYFIVVDFKGEKGNLGQQGLPGRQGFSGRRGLDGLPGASGDPGPQGEGFPSSPGDRG HNGYPGTKGSPGPSGPPGRDVVGAVGQRGPPGDSGPQGLPGPPGPTGVQGDTLPCVPRNP GAPGEKGDTGNAGYPGFSGPPGFRGITGPDGAKGDKGQFGLSGPPGRRGPPGVVGDPGDE GREGVSYDGDPGSPGVPGSSGLSGSAGDSAVGPSGPIGFPGPLGSQGPKGVPGPPGTNGL PGVLGLAGGPGVQGQRGQDGSPGVPGPRGPTSTRCEAGTPGPVGLFGPQGPIGPPGFLGE KGEFGEVGPPGLGPQGPKGKSGSPGLPGYPGPQGPSGLSGDSGFPGPDGEKGVIGPRGQD GELGAPGQTGALGYPGIKGERGLNGVDGGLGCEGTKGEIGCKGFPGPQGETNGVPIKGQR GEEGAPGYPGFPGPRG NT seq 2751 nt NT seq  +upstreamnt  +downstreamnt gggtatccaggccctctggggcagcagggccctcagggcccccccggcttcccgggcccc caggggcctccaggagaaaaggcccagagaggagacgaggggccaatcggagccgccggg ctgaaaggagactcgggaaatttcggcgttcctggttttcccggtttagaaggagtcccg ggtcacccgggtccagctggaggtccagggtttccaggtctggacgggtgtaacggaacc agaggagagagaggagatcctgggatttctggacaacaaggaacttatggagaaccgggt ttctcaggactgaagggatttccaggagatcccgccgtctactacatacagtatccagga atatctggcgacgtcgggcccagtggatttactgctttgtcgggcgagccgggcctctcc ggtctgactggagttctgggtcctgcaggaccggacgggaccaacggtctccctggtctg cccggcttcaggggttcacctggagaaaaaggtcgatctctgccgggacagaaaggagac gagggggatcagggcctccaaggacctccgggaccgtttgagtacgtcgaccctccagaa gacctctaccttaaaggagaaaagggggatccggggcctaaaggcatctgtgcagtaaca ggactgccgggtctggatgcacttccagggatcttaggagagaaggggattgtgggattt cctggacccagggggttttatggtaaccttggtgtgcccggagagagcggattcaagggg acgcggggaatcccaggtctcccaggtctgattggacgggaaggtcctaagggtttgacg ggagatcccggtcctaaaggcgtccctcaggatgtagaggtcacacacacaggtgacaat ggagaccccggggccctcggacccaggggccccccaggagacatcgggctgatggggatg cacggcccccccggagcacccggaagatcattatctggtcccaggggtgttgtgggtgag agggggtctctaggatccaggggggaccgaggagacccgggtctggtttataaagatcaa ctcacaccgggagaaccaggaaaaccaggacggctcggaccacaaggactgaaaggagaa caggggacaccaggtacttactgttttgaaggagctccaggagagtctggagatcctggt gatcaggggccacaagggtcccagggcttccaagggtttaaaggtagttctggaggctgt gattgtggcccccccattgtgatgaagggcctccctggaccggagggtgatcgggggtct ccaggatattcaggaacatcaggggccccggggctgagaggagagaaaggtttacctgga gacacaggagtacgcggagaacagggtttggggggatttccaggtgtcgtagggttcaaa ggtcagaagggatatttcattgtggtagattttaaaggtgagaaagggaacctgggccag cagggccttccaggcagacaagggttttcagggaggagaggcctcgatggactcccaggg gcctccggagaccccggcccccagggggaaggtttccccagttctcctggagacagaggc cacaatggttacccgggaacaaaagggtcaccaggaccttcagggcccccggggcgagat gtagtcggagcagtaggacagcgagggccccctggagactcaggaccacaaggactccct ggccccccggggccgacgggggttcaaggtgacactctgccctgtgtacccagaaaccct ggcgcccccggagagaaaggagacactggaaatgcagggtacccaggtttctcgggtcct ccaggttttcgtggcatcaccggacctgatggagctaaaggagacaaaggacagtttgga ctgtctggtccacctggacgacgaggacccccaggtgttgttggagaccccggagacgaa ggccgagaaggcgtcagttatgatggagatccaggctctccgggggtcccaggctcttct gggctcagcgggtcagcaggagattctgctgtcgggccctcaggaccaatcggattcccg gggcctttgggctctcaggggcccaaaggagtgcccggaccccccggcaccaacggacta ccaggagtcctgggtctggctggaggtcctggagttcagggccagagaggacaggatggg tctcctggtgtccccggccctcgggggcccacatctacccgctgtgaggcaggaacacct gggccagtgggcctctttggccctcagggacccataggacccccagggtttctgggggag aaaggagagttcggggaggttggccccccaggtttgggccctcagggtcctaaagggaaa tcaggaagtccaggtctcccaggttacccggggcctcagggaccctctggcctcagtgga gactccggcttcccggggccagatggagagaaaggtgtgattggaccccggggccaggat ggagagctgggggcccctggacagaccggggccctcggatacccagggataaagggagag agagggttaaacggagtagacggcggtttaggatgcgagggaaccaaaggagagataggc tgtaaagggttcccggggcctcaaggagagacaaatggtgtccctatcaaagggcagcga ggagaagaaggagcgcccggataccccggcttccctggaccacgaggttaa

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