Trematomus bernacchii (emerald rockcod): 117499454 Help Entry 117499454         CDS       T09643                                  Name (RefSeq) vinculin-like isoform X1   KO K05700   vinculin Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04510   Focal adhesion tben04517   IgSF CAM signaling tben04518   Integrin signaling tben04519   Cadherin signaling tben04520   Adherens junction tben04810   Regulation of actin cytoskeleton tben04820   Cytoskeleton in muscle cells tben05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:tben00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     117499454    04518 Integrin signaling     117499454    04519 Cadherin signaling     117499454  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     117499454    04520 Adherens junction     117499454   09142 Cell motility    04820 Cytoskeleton in muscle cells     117499454    04810 Regulation of actin cytoskeleton     117499454  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     117499454  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:tben04812]     117499454    04147 Exosome [BR:tben04147]     117499454 Cytoskeleton proteins [BR:tben04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      117499454 Exosome [BR:tben04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    117499454 SSDB OrthologParalogGFIT Motif Pfam:  Vinculin Talin_IBS2B CorA Motif Other DBs NCBI-GeneID:  117499454 NCBI-ProteinID:  XP_034007729 LinkDB All DBs Position Unknown AA seq 1159 aa AA seqDB search MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ ELTHQEHRQMLVNSMGTVKELLPVLISAIKIFVSTKTSRGAGVEEAEMNRRFTFEKMSAE IHEIIRVLQLTTWDEDAWANKKDMEALKRYLALIESKMAQAKGWLKDPHGQPGDPGEVAL RVILDEAGKVGELCAGKERKDILATSKALGQMSDQVADLRARGQGPTPGCVQRAGQCSQG LDLLFGKVDNAARRLEALINAKQSIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIA DLCEDPKERDDILRSISEIAGLTARLVELRRQFKQQRHVINRWHILPAWKICCCLSTIGM SPTIRGKGDSPEARVMAKQIGAALLNLQSKTNRAVANMRPAKPDVTLEGKMEQALRWVSN PGVEDRGVGQAAIRGMVGEGKRLAGGLIGPYRQDMIGRCDRTEGLMTNLADMAGRGEAEA PHARATAAQLQDSLKDLRRHMQEVMTQEVSDVFSDTTTPIKLLAVAATAPPEAPNREEVF EERAGNFEAHAGRLGATAEKAAAVGSANKSTVEGIHAAVKHARDLTPQVTTAAVILLKNP GNKAAYEHFDTMKNQWIDNVEKLTGLVDEAIDTKSLLDASEEAIKKDIDKCRVAMANVQP QMLVAGATSIARRANRVLLVAKREVENSEDPRFRDTVKNASDILSHTISPMVMDAKAVAG NIQDKALQKAYLDSCLRILAAVGKVREAFQPQEPDFPPPPPDLDQLHVSDEQAPPKPPLP EGEVPPPRPPPPEEKDEEFPEQKVGEVLSEPMMVAARQLHDEARKWSSKPVEEEAVEERE VYDEDEFTDGEDDYEPELLMMPSNQPVNQPMLAAAQALHQMARKWSSKGNDIIGAAKRMA LLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCER IPTISTQLKILSTVKATMLGRTNISEDESEQATDMLVHNAQNLMQSVKETVREAEAASIK IRTDSGCTLRWVRKTPWYQ NT seq 3480 nt NT seq  +upstreamnt  +downstreamnt atgccggtgtttcacaccaagaccattgagagtatcctggagccggtggcccagcagatc tcccacctggtcatcatgcacgaggagggggaggtggacggtaaagccatcccggatctg acggtgccggtggccgcggtgcaggcggcggtcagcaaccttgtacgggtggggaaggag acggttcaaaccaccgaggaccaggtgatgaagagagacatgcctcctgcgttcatcaag gtggagaactcgagctctaagctggtccaggcggctcagatgctaaaggccgatccctac tctgtgcccgctcgagattacctgatcgatggatccagagggatcctgtccgggacgtca gacctgctccttacctttgatgaagcagaggtgcgtaagatcattcgggtgtgtaaaggg atcctagagtatctgacggtagctgaggtggtggagaccatggaggacctcatcacttac accaagaacctgggaccagggatgaccaaaatgtcaaagatgattgaggagaggcagcag gagctgacgcaccaagaacacagacagatgctcgtcaactccatgggcactgtcaaagag ctgctgccggttctaatatcagctattaagatttttgtatcaactaagaccagtcgcggt gccggtgttgaagaggcagagatgaaccggagatttacctttgaaaagatgagcgctgaa atccacgagatcataagagtcttacagctcactacatgggatgaagacgcctgggccaat aagaaggatatggaggctttgaagagatatttggctttgattgagtcaaagatggcacaa gctaaaggctggctcaaagacccccatggacaaccaggagaccccggtgaggtcgccctg cgtgtgattctggatgaagctggcaaggtgggagagctttgtgccggaaaggagaggaaa gatatactggcaaccagtaaggctctgggacaaatgagtgaccaggttgcagatctacga gccagaggacagggcccgaccccggggtgtgtgcagcgtgcaggccagtgctcgcagggc ttggacttgttattcggcaaagtggacaatgctgctcgtagactggaggctctaatcaat gccaagcagtccatagccaggaggctggacgctgcacaggcctggctggctgatcctaac ggcggtcctgagggggaggagaacatcagagcgctactcgcagaagccaaacgcatcgcc gatctctgtgaagaccccaaagagagggacgacatcctgcgctccatcagcgagatcgca ggcctcaccgccagactggtggagctacgcagacagtttaaacagcaacgtcatgtcatc aatagatggcatattctacctgcctggaaaatatgttgttgcctgtcgaccataggcatg agtcctacaataaggggtaaaggggacagcccggaggcccgtgtaatggcaaagcagatc ggagcagcgctgctgaacttgcagtccaaaaccaaccgcgctgtggccaacatgagaccg gccaaacctgatgtcaccctggagggcaagatggagcaggccctccgctgggtgagcaac cccggagtggaagacagaggagtaggtcaggcagcgatcagagggatggtgggagaagga aagaggctggcaggaggcttgataggcccgtaccggcaggatatgattggacgctgcgac agaacagaaggtctaatgacaaatttggcagacatggctggcaggggcgaggctgaggct ccgcatgcacgagctactgccgcacaactgcaggacagcctcaaggacctgaggcggcac atgcaggaggtgatgacccaggaggtatcggacgttttcagtgacaccaccacccctatc aaactgctggctgtggctgcaactgctccccctgaggcccctaacagagaggaggttttt gaagagcgtgcagggaactttgaggcccatgcaggccgtctgggggcgaccgcagagaag gctgctgctgtgggatcagccaataagagtacagtagaggggatacatgctgctgtgaaa catgccagggatctcacaccacaggtgaccacggctgctgtgatcttgttgaaaaatcct gggaataaagccgcatacgagcactttgacaccatgaagaatcagtggattgacaatgta gagaaactcactggtctggttgacgaggccatcgacaccaaatctctgttggatgcttct gaggaggctataaagaaagacatcgacaagtgccgagttgccatggcgaatgttcagccc caaatgcttgttgccggggcaacaagcatagcaagacgagccaatagggtcctgttggtg gctaagagggaagtggaaaactctgaggatccgcggttcagagatacggtgaaaaacgca tcagacatcctctcacacaccatctctcccatggtgatggatgctaaagccgtggctggg aacatacaagataaagctctgcaaaaggcatatttggactcttgtctgaggatcctggct gcagtcggaaaagttagagaagccttccaacctcaggagcccgacttccctcctccccca cctgacctggaccagctccatgtgagtgatgagcaggcgccacctaagccgcccttgcca gagggcgaagtgcccccccctcggcccccgcctccggaggagaaggacgaggagttccca gagcagaaggttggggaggtgctcagcgagcccatgatggtggccgcccggcagctgcac gacgaggcccgcaagtggtccagcaagcctgtggaggaggaggcagtagaggagagagag gtttatgatgaagatgagtttactgatggtgaggatgactatgagccagaactgctgatg atgccctccaaccagcctgtcaatcaacccatgctggcagctgcccaggctctccaccag atggcgcgcaagtggtccagcaagggtaacgacatcatcggtgcagccaagcggatggct ctgctaatggcagaaatgtctcggctggtgcgtggtggaagtgggaacaaacgagcgctg attcagtgtgctaaggacattgccaaagcgtccgatgaggtgacgagactggctaaggaa gtggccaagcagtgcactgacagacgcatcagaactaacctgctgcaggtgtgtgaacga atccctaccatcagcacgcagctgaagatcctctctactgtcaaagccaccatgctggga cgaacaaacattagtgaagatgagtcagagcaggccacagacatgttggtgcataacgcc cagaatctgatgcagtcggtgaaggagacggtcagagaagcagaagcagcctccatcaag atccgcacagattcaggatgcacccttcgctgggtgcgcaagaccccctggtaccaataa

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