Trematomus bernacchii (emerald rockcod): 117499554
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Entry
117499554 CDS
T09643
Symbol
pdzd7a
Name
(RefSeq) PDZ domain-containing protein 7a
KO
K21882
PDZ domain-containing protein 7
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117499554 (pdzd7a)
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117499554 (pdzd7a)
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117499554 (pdzd7a)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117499554 (pdzd7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117499554
NCBI-ProteinID:
XP_034007896
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MARSPHPSGWREMTNGGGHPSYNHGGQTGGSHSTPRYMQKKHHRHRRRSSSPMGRVILIN
SPVDGGEDSEDIHTVTVDKSPDGRLGFSVRGGSEHGLGIFVSKVEDDSTAEQAGLMVGDK
LVEVNGVSLESITMSSAVKVLTGNNRLRMVVRRVGKIPGIRYSKEKTTWVDLIHRRMVVE
ESGRTPSETSSDSALRRIVHLFTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAEQHGI
KMGDQILAANGIGFDDITHSNAVEVLKSHTHVMLTIREAGRYPAYKEMVAEYGWLDQQAN
GGRAPSSQGSDSNSSASSWSSSTPLSSLSGLSQVLFPQVFGPDMVDIAISTEDRSRRPSS
AERTADTAMQTDPHPPNYQDHPLTNGSFPEMPVTTETSRTVGATVLLKDTVIRGIGEGPK
EMGGAGEGGRRRTRTLSSGKQEEVKESPKTAALMALSRPRKPIRRSQSHITASEEKQKKK
KQQKEKSTREGKTSLQRSKTFVNLFFKKDRKGKSRSKSPSHQADKDKERGRSFQLLTSPR
ESRAGVKDNSPLPRPETLQHVEDMAKRLLSQDEVAAVMRHCRRFLSENVTEDLVRPLLAI
LDRPEKLLLLREIRMLIPISELGRFDSMVMPFELEAYDILKSRSVRSPALRSPRSGTPRR
HLITPVPDYRGGFHLQPVQDTQPERQLIEDFERLRFSGQQSGHLPPSRAFTPLLDVPVDS
YTSSTGRTRSLSPSPTHSLLLTESPHSTQRGRQPHRSPNRRENGASRYDDVSLLSASDRG
DLDRGRSPVRNGHGRARREVSPDSMEGRQRRQEGFTGVSVRVPSQRKGRTLLSDVFEPQR
DKSPSTGRESSQQLNGHSQNGHGVKRRAPEEYEINTLTITKAKQSLGISISGGMESRVQP
MIKIEKIFPGGAASTNESLKAGYELLSVDGESLQGVTHQHAVDVIRRAFSNKAKDPMVFM
VKVPKVPSSPRRPAD
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcccctcacccctctggctggagggagatgacaaatggaggagggcacccc
agttacaaccatggtggccagaccgggggttcccacagcacaccgcgctacatgcagaag
aaacaccaccgccacagacgcaggtcatcctccccgatgggccgggtcattctcatcaac
tcacctgttgatggaggcgaggacagtgaagacattcacacagtgacagtagataagagt
ccagatgggcggttggggttcagtgtccgtggggggtctgaacatggtctcggcatattt
gtcagcaaggtggaggatgacagcactgcagagcaggctgggctgatggtgggcgataag
ctggtggaggtgaacggggtcagcctggagagcatcaccatgagcagcgctgtgaaggtc
ctgacgggcaacaacaggctgcggatggtggtgagacgagtgggcaagatccccggcatc
cgctactccaaggagaagaccacatgggtggatctgattcaccggcggatggtggtggag
gagagcggtcgcacaccgtcagagacgagttcagacagcgctctccgcaggatcgtgcat
ctcttcaccacatcagatgactactgtctgggcttcaacatcagaggaggcaaagagttt
ggactgggaatttatgtttctaagttggacccgggtgggcttgcagaacaacatggcatc
aaaatgggcgatcaaatccttgcagcaaacgggatcggttttgacgacatcacccatagc
aacgcagtcgaggtcctgaagagccacacccatgtcatgttgaccatcagggaagccggg
agatatcctgcttacaaggagatggtggcagaatacggctggctcgaccaacaggccaat
gggggccgtgctccatcctcccaaggatcagactcaaactcttctgcctcctcgtggtcc
tccagcacccctctcagctccctcagtggtctctcccaggtccttttccctcaagtgttt
ggcccagacatggtagacatcgccatctccacagaggaccgctcccgacgtccaagcagc
gcagagagaactgctgacaccgccatgcagaccgacccccatcctccaaactaccaggac
caccccttaaccaatgggtcgttccctgaaatgccagtcaccacagaaaccagcaggact
gtaggggccacggtgcttctgaaggacacagtgattcgagggataggcgaagggccgaag
gagatgggaggagctggagaaggagggcggagacgtacaaggacgctgtcatctgggaaa
caggaagaagtgaaagaatcacctaagacggcggcgctgatggccctgagcagaccgcgt
aaaccaatcagacgttcccagagccacatcactgcatcagaggaaaaacaaaagaaaaag
aaacagcagaaggaaaagagcacgagagagggtaaaaccagcctgcagcgatccaaaacc
tttgtcaacctcttctttaagaaagaccgtaaagggaagagccgctccaagtcaccgtcc
caccaagcagacaaagataaggagcggggtcgttccttccagctcttgacctctccgagg
gaatcccgtgctggggttaaagacaacagccccctgccccgaccagagaccctgcagcat
gtggaggacatggccaagagactgctcagtcaggatgaggtggctgctgtgatgagacac
tgcaggcggtttctatccgagaatgtgactgaggatttggtgcgtcctcttttggcaatc
ttggacaggccagagaaactgctgcttctcagagaaataaggatgttgattcctatatca
gagctgggtcggtttgacagcatggtcatgccctttgagctggaggcgtacgatattctg
aagagtcgctctgttcgttctccagctctgcgctcccctcgcagtggaacccctcgccgt
cacctcatcacgcctgtcccagactacaggggtgggttccacctccagccggtccaggac
acccagccggagcgtcagttgattgaggatttcgagaggttgcgtttttctggccagcag
tcaggccatctgcctccatcccgtgccttcacccctctgctggatgtacctgtggacagc
tacacctcctccaccgggcgcacccgctccttgagtccctcacccacccacagcttactc
ctcacagaatcacctcacagcacccagcgtgggcgccaaccccatcgctctcccaacaga
agagaaaacggggcctcgcggtatgatgacgtctccttgttgtcagcgtctgaccgagga
gaccttgatcgagggaggtcacctgtgaggaacggccatgggagggcaaggagggaggtg
agtcctgacagcatggagggcagacagcgcaggcaggagggcttcacaggggtcagcgtt
cgcgttccttcacagcggaaagggagaacccttctgtctgatgtgttcgagccccagaga
gacaagagtccatctacaggcagagagagcagtcagcagctcaatggacattcacaaaac
ggtcacggtgtgaaaagaagagcacctgaagagtatgaaatcaacactttgaccatcacc
aaggccaagcagtcactgggtattagtatctctggagggatggagtcaagagtgcagccc
atgataaagattgagaaaatattcccaggaggagctgcgtctacaaatgagtctcttaag
gcaggatatgagctgttgtccgtggacggcgagagtcttcagggggtgactcatcagcac
gcggtggacgttattcgcagagcgttcagtaacaaggccaaagacccgatggtttttatg
gtcaaggtcccaaaggtccccagcagccccaggagacctgcggactaa
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