Trematomus bernacchii (emerald rockcod): 117499595
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Entry
117499595 CDS
T09643
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117499595 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117499595 (srfb)
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
117499595 (srfb)
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
117499595
NCBI-ProteinID:
XP_034007981
EnsemblRapid:
ENSTBNG00005017571
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MLPSRVGSAPSGNGSATGRGNTGHGSGVVGSGIRPVLVRAGQALAGVESIGRQGERDAVG
MLGANGPGGSRGVRPGNGTGVTTLQPSVQGNMVGLNQGGMPHGARFEERDVAPLCSGSDN
DSDSGDDDDPVGSLGDNRRGVKRERGEMEAAVSGQDVGMPPGGYGMVPGGVAGAKPGKKT
RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATR
KLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESMGDTK
DTLKPTFTVASLPGSAQCTVPTTSTTMQVSSGPSFPITNYLAPVSANSNINANGTVLKTT
SSGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQASQHQQGQQAVFRFP
AGVSLSGAGLPQQLQAIQVHHNTTSNSDGSLDISHTSSNSTATVSLPATIVTSSMPTSVA
GHMMYPSPHTVMYASAPTLSDGSLAVLNAFSHGTSAMQVHGQGQDSGVPQVFLTAPPGTV
QIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAVQNSKD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccgggttggatcggcaccatctggaaacggctcagctacaggcagggga
aacacgggacacggttcgggggttgtcggaagcgggattcgtcccgttttggttagagca
gggcaagctttagcaggggtcgagagtatcgggagacagggggagagagacgccgtcggg
atgctaggggctaatgggccagggggttcgagaggtgtgagacccgggaacgggaccggg
gtgaccaccttgcagccctccgtgcagggcaacatggtggggctaaaccagggaggtatg
cctcacggagccaggttcgaggagagagatgtcgctcctctgtgcagcggctcggataat
gactcggactccggagacgatgatgacccagtgggttcactcggggacaacaggagaggg
gtgaagcgggagagaggagagatggaggctgcagtgtcggggcaggacgtgggcatgcct
cccgggggttacggaatggtgcccggcggggtcgcaggggcgaagccggggaagaaaaca
cgtgggcgagtgaagataaagatggaatttattgacaacaagttaagacgttacaccacc
ttcagcaagaggaagaccggtataatgaaaaaggcgtatgaactctccaccttgacggga
acccaggtactgctgctcgtggccagtgaaacgggtcacgtctacacttttgcaacgcgc
aaactccaacccatgatcacgagtgaaacgggcaaagctctgatccaaacgtgcctcaac
tcaccggactcgccgccacgctccgacccctccacggaccagcgcatgagcgcaacgggc
ttcgaggagacggatctcacctatcaggtgtctgagtcggagagcatgggcgacacaaag
gacacactgaagcccacgttcacggtggccagcctgccgggcagcgcccagtgcacggtg
cccaccacctccaccaccatgcaggtgagcagcgggccctcgttccccatcaccaactac
ctggcgcccgtctcggccaacagcaacatcaacgccaacggcaccgtcctgaagaccacc
agctcgggggtcatgcagctgcccggcggcttcaccttcatgcccgcaggcactcctctc
ccccccggcacccccaccattcctctgagccagctgcagcagcactccctggccctgcag
gggcagcatgggcaggcctcccagcaccagcagggacagcaggctgtcttccgcttccct
gctggtgtctccctctcaggagcaggcctcccccagcagctccaagccatccaggtacac
cacaacaccacctccaacagcgacggcagcctcgacatctcccacacctcctcaaactcc
accgcgacggttagtctcccagcaaccatcgtcacctcgtctatgccaacatctgttgcg
ggtcacatgatgtaccccagcccgcacacagtgatgtacgcctcggcgcccacgctgtcc
gacgggagtctcgctgtgctcaacgccttctcgcacggcacctcggccatgcaggtccac
ggacagggccaggactcaggtgtcccgcaggtgttcctcacagcacccccaggcacggtg
cagatccctgtctcagcggtgcagctacacccaatggtgattggtcaacagtcgagcggc
agcagcagtaacctgacggagctccaggtggtcaacttggacgcagtacagaactcaaag
gactga
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integrated database retrieval system
