Trematomus bernacchii (emerald rockcod): 117499623
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Entry
117499623 CDS
T09643
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tben03029
]
117499623 (lrpprc)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
117499623 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
PPR_long
Wzy_C_2
TPR_MalT
TPR_24
Motif
Other DBs
NCBI-GeneID:
117499623
NCBI-ProteinID:
XP_034008037
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MAALLRSSRLLKCSPLGLLQISGTKRTGPPLRLLFSGPLGARGTGVCSRHISPVSGNASS
RVWPYTVGCVRNYAVATEQKDEPSIAERPNQAQEFDFALARLDSSVRRTGRITKVQLNRI
FQDICKKAYPSGNQALLLLRSCGSLMPEVPLEQRTELAHQVWEKLQELGTVYDVSHYNAL
LKVYLQNEFKFTPTDFLAKMEAAKVQPNRVTYQRLIAAYCQNGDIDGASTILGYMKSNDL
PITEAVFNSLVTGHAQAGDIESAKKILTVMEGAGIEPGPDTYVALLNAYAGKGDLDNLKK
TMEAADSAMCRLVDRDLMPVIITLAKAGHQEHIPHMLERFSHERAYVPDAMNLCLSLTTQ
GLEDTAFYILKNFPSLQNNPSLQSKDTIIEPHLGNFLLRHCVNIDMSPEKICRVCKELQE
SKLNTEPAIFTLNVALETQKTALSLALMKMLKELDLPIRPHFFWPLLSPHVKERNQAGVV
ELLKSMHDLKIEPDSETLTHYVYPAFADVEAAREALKDAGMSLESEGIFAAQVRSLALTN
LAELHAMLSDPSCPVTDLSVFRGSLIVGFKKFSDVESMVKMIELLSKDPRFSRDGKETHN
TSAFFLYHFIDHMSEREVHANKDKLRIFFNQLKDQKISVTPNIYRGIRRLLDSYQASELV
KDVGALVNYGLESDALPGSGPESGGYALEKIGSRVYALEKKLAKRKSENQPLGFMLKQTI
QSHAAEDNLVRALELKQEYEDEMLLPAYATLIGLCCRHDNVEEALNLKRELTRKDSSVTL
DGNKYISLVNSLAKKDRIEEAVDLLKEMKERDVVLTDKNNTQLFHMLFSLANNGAASTVE
RLQDSIFTLGLAKPTTLLLSPLMTAYIKNEDLSGALEAASRCLKLYNKMVPVHGIMVAMV
EKGDADLLQKAMEFASNERGEMAMMFDLFFAFLQTGRYREARKIIETPGLRARTTRISWF
AAKCINSNQIEPLEQMVGMTEKLFDCDRDEMYSYLLKHYEVTNEWQKAVALWTKMQEENL
IPRDGTLLLLAKILKKNGQEVPFDVSTMWYQEEEAPAEVKREAPTPKIEAPTPKIEAPKP
KVEEGPSSKDPSFQSPIIALCKKNRAQEALKMFKEAKDSPFNAKSFNLLICVLLSEGSIK
DAMAVKDIATSRIPEFQMSHAANDLYIITTTMKGQANDALERMKRADHMPSKLALTRLVQ
ALGNSGNVSGIQEVEELIKDKVVNLPTMPVVTRTAIAHIKSGDVEGATEVLEAFYTNPDC
ESQPQGMPYVFNMVLEDNNEEALDKLSAMAERLANQFARYQPVSDLFLELLDADKVEDAK
FMLARNNAVAEQTDTLVAYIFRKSRTPGQLGKIETLLSLIPDFAEKDVVNKHVMRCHIND
KDFSSAKALYEEWQKSEGEIDTVSLKRLAVMYRKFGETVPFNEPQESIRFYELKEKAQKK
EKAQKEAET
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctcttgagatcatcccggctacttaagtgttcgcctttgggcttgcttcag
atctcaggcaccaaaagaaccgggccgcccctccgcctgctgttcagcggacctctcggc
gccagagggaccggagtttgttcccgacacatcagccctgtttcgggaaacgcgtccagt
cgcgtgtggccctatacagtggggtgtgtgcgtaactatgccgtggccacagagcagaag
gatgagcccagcattgcggagcggcccaatcaggcgcaggagtttgacttcgctctggcc
aggctggacagctcagtgaggagaaccggtcgcatcaccaaggtccagctgaaccgcatc
ttccaagatatctgcaagaaagcttatcccagtggtaaccaggccttgttgctgctgcgg
agctgtggctctctgatgccggaggttcctctggagcagcgcactgagctggctcaccaa
gtgtgggagaagctgcaggagctgggtacagtgtatgatgtgagtcactacaacgccttg
ctgaaagtgtacctgcagaatgagttcaagttcacccccactgacttcctggccaagatg
gaggcagcgaaggtccagcccaacagagttacctaccagagactcattgcagcatactgc
caaaatggagatatcgacggagcaagcaccatactgggttacatgaagagcaacgattta
ccaatcactgaggccgttttcaactccctggtgacaggccatgcccaagcaggggacatc
gagagtgctaagaaaatcctgactgtgatggagggagcaggaattgaacccggtcctgat
acttatgtagcgctgcttaatgcctacgctgggaagggagacctggacaatttgaaaaag
acgatggaggcggcagatagtgcaatgtgcagactggtggacagagacctcatgccggtc
atcatcactctggccaaggccggacaccaggagcacatcccacacatgctggagcgcttt
agtcatgagagagcatacgttccagatgccatgaacttgtgcctgagcctcaccacacag
ggcctggaggacacagctttttacatcctgaagaatttccccagcctgcagaataacccc
agcctgcaatctaaagacacaatcatcgaaccccacctgggcaacttcctcctcagacac
tgtgttaacatagacatgtcaccggaaaagatttgccgcgtttgcaaagagctgcaggag
tctaaactgaacactgagcccgccatcttcactctgaacgttgctctggagacccaaaaa
acagctctctccttggcgctgatgaagatgctgaaggagctggacttacccataaggcct
cacttcttttggcctctccttagtccgcatgtgaaagagagaaaccaagctggagtggtt
gagttgttgaagagcatgcatgatcttaagatcgaacctgatagcgagactctaacccac
tacgtctaccccgccttcgccgacgttgaagcagctcgagaggccctcaaggatgcaggc
atgtctttggaatcagagggcatctttgctgcacaggtccgctcactggctcttaccaac
ctggccgaactacacgccatgctgtcggatccatcttgcccggtgacggatctcagtgtt
ttccgtggcagcctcatcgtcggcttcaaaaagttctctgatgtggagagcatggtgaag
atgattgagctcttgtccaaagacccgcgcttctcaagagacggcaaagagacgcataat
acttcagccttcttcttgtaccattttatcgaccacatgtcggaaagggaagtgcatgca
aataaagacaagctgcggatattcttcaatcaactaaaagatcagaagatatctgtgaca
ccgaacatctacagaggcatcaggaggctgctggactcctaccaagcctcagagctcgtc
aaggatgtgggtgctctggtgaactatggcttggagtcagatgctctccctggctcgggg
cctgagagcggggggtatgctcttgagaagatcgggagcagggtgtatgctcttgagaag
aagctcgccaaaaggaaaagcgagaaccaaccattgggcttcatgctcaaacaaaccatc
cagagtcacgccgctgaggataacttggtgcgcgccctggagctgaagcaggaatacgag
gacgagatgttgctccccgcatacgccaccctcatcggcctgtgctgtcgccacgacaac
gtggaggaggcgctcaacctgaagagggaacttactcgtaaggactcgtcagtgacgctt
gatggcaataaatacatctcactggttaattctctcgcaaagaaagacagaatagaggag
gcagtggacctcctgaaggagatgaaagagagggatgtggtgttaactgacaaaaacaac
acgcagctcttccacatgctcttttctctggcgaacaatggcgccgcctccaccgttgag
cgcctgcaggactccatattcaccctcggactggccaagcccaccaccctcctcctctca
cccctgatgactgcatacatcaagaacgaggacctgtccggagctctagaagcagccagc
cgctgtctgaagctctacaacaaaatggttccagtccacggcatcatggtggctatggtg
gagaaaggagacgctgacctgctgcagaaagccatggagtttgcgagtaacgagcgaggg
gagatggcgatgatgttcgatctgttcttcgctttcctgcagacaggccgctaccgcgag
gcccgtaagatcattgagacccctgggctgagggcaaggactacgcgcataagctggttt
gcagcgaaatgtataaactccaaccagattgagcccttggagcagatggtgggcatgacg
gagaaactgtttgactgcgacagagacgagatgtacagttacctcctcaaacattacgag
gtaacaaacgagtggcagaaagcagtagcactttggacgaagatgcaggaggagaacctc
atccccagagatgggaccctgctccttctggccaaaatcctgaagaaaaacggccaggag
gtgcccttcgatgtgtccacgatgtggtaccaagaagaagaagccccagccgaggtcaaa
agagaggcacccacgcccaaaatagaggcacccacgcccaaaatagaggcacccaagccc
aaagtggaagaaggcccaagctctaaagacccaagctttcaaagccctatcattgccctc
tgtaagaagaacagagcccaagaagccttaaagatgtttaaggaagccaaggattcgcca
tttaacgccaaatcattcaatctactgatctgcgtgctgctgtccgaggggtccattaaa
gacgccatggcagtcaaagacattgctacatctcgtataccagagttccagatgagtcat
gctgccaacgacctgtacatcatcactaccaccatgaaaggccaggctaatgatgctctg
gagagaatgaagcgggctgaccatatgccctcaaagctcgccctcaccaggctggttcag
gcgctcggcaacagcggcaacgtgtcggggatccaggaagtggaggagctgataaaagac
aaggtggtcaacctgcccaccatgcctgttgtcacccgcacagcgattgcacacatcaag
agtggtgatgtggaaggtgcaacagaggtgttggaggccttctacaccaatccagactgc
gagagccagccacagggcatgccctacgtcttcaatatggtactggaagataacaatgag
gaagcgttggacaaattgagtgctatggcagagcggctagccaatcaattcgcccgctac
caaccggtgtcagacctctttctggagctgctggacgccgacaaagtggaggacgccaag
ttcatgctggctcgcaataacgctgtggcagaacagacggacacgctcgtggcctacata
tttcggaagtctcgcacccccggacagctgggcaagatcgagacccttctgagcctgatc
ccagacttcgctgagaaggatgtggtgaacaagcatgtgatgagatgtcatattaacgac
aaagacttttcgtcggccaaggccctgtatgaagagtggcagaagagcgaaggggagata
gacacggtgtcactcaaacggctggccgtgatgtacagaaagttcggagagacggtgccc
ttcaacgaaccccaggagtccattaggttttatgagctgaaagagaaagcccagaagaaa
gagaaagcccagaaggaagcagagacataa
DBGET
integrated database retrieval system
