Trematomus bernacchii (emerald rockcod): 117499691 Help Entry 117499691         CDS       T09643                                  Symbol ccdc88ab Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tben03037]     117499691 (ccdc88ab) Cilium and associated proteins [BR:tben03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    117499691 (ccdc88ab) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N KASH_CCD HOOK DUF4472 Motif Other DBs NCBI-GeneID:  117499691 NCBI-ProteinID:  XP_034008148 LinkDB All DBs Position Unknown AA seq 2024 aa AA seqDB search MESEVFTPSLEQFMLTPLVCWVKTVGQATLTDGTQLSEYIELVDGIYLNEIMLEINPTAT VQRTNKKVNNDPTLRIQNLSILIRQIKDYYQETLQQLVMMPLPNVLILGKNPLSEQGLEE VKKLLLLLLGCAVQCEKKEEYIECIQTLDFDTKAAIASHIQEVTHNQENVVDMQWLESGE MPPEDLDSLSRNLAFHLKRLVDERDTQLETIVELTQERDCVQLSPLASCQTQSPGDSPGM RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELDNSEGELKKLQQESYQLLS DARSARAYRDELDALREKAIRVDKLESELSRYRERLHDIEFYKARVEELKEDNQVMLETK SMLEEQLDASRQRSDKLHLLEKENLQLNSKIHDLEMERDMDRKRMEELLEENLVLEMAQK QSMDESLHLGWELEQLSKTPDLTEAPQKSLGEEVNELTSSRLLKLEKDNQSLLKTVEELR GTASQDTVTKLSKASQENQRLNHKLEQLASELTSDRDSLRSAESLSTDLMKEKALLEKTL ETLRENSERQLKGLEQENKHLGQTVSSLRQRSQVGAEARVKDVEKENRVLHESICETTAK LNKMEFERKQLRKELEVVKEKGERAEELEIQIQKLEKGKESLQKKISSLTITCEKVCSLE KENSELAAEGRRLKKKLDTLKNMAFQLEALEKENSQLEHENLEVRRLAESLRSSGAKAAQ LEAENRELESERSQLKRSLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIIQL EAELQEVETENQSLQRNLEELKISSKRLEQLEQENKCLEQESSQLEKDKKYLEKENKRLR QQAEIRDSKLDDDNQRIVTLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKISNIDKK TLNNLREELVSEKLRTQQMHNDLEKLTHELEKIGLNKERLLHDEGSDDRFRLLETKLEST LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG GEAPQAVSKWEKESHETTRELLKVKDRLIEVERNNATLQAEKAALRSQLKQLETQSSNLQ AQIVAVQRQTASLQENNTSLQTQNAKLQVENSTLSSKSGALMAQNAQLQTQQSSVEGERE GALKDKEELRSTYELLLRDHEKLAALHERQASEYEALIGKHGGLKTSHKSLEQQHRDLED KYKQLMQRKGELEDLEKNLKEQQEKMALENQTHRSTADQFKLLKEENDRLNNTHRQLVKD NDNLQLDHKNTKTQLNSAKLEQTKLEAEFSKLKEQYQQLDITSSKLTNQCELLSQVKGNL EEENRHLLDQIQTLMLQNRTLLEQTMESKDLYHVEQRQYIDKLNELRRQKEKLEEKIMDQ YKFYDPSPPRRRGNWITSKMKKLIKPKSRDRLRSLTLTPSRSEYGDGFLTLPQDCQDSSS IGSGSNSLDDTLTQKKSSRRRGQQAHAQGQGSTNALKRLPFMRNRSKDKDKAKAIYRRSM SMNDLLQTMAVAGGPGAEWASSIDHLDGAEAGDRDMAGSSRRSGRSMKELTFSTNTIDYA TLTLPTARQSRAKLRLQVKDNASCEDVAGSLDDPKIQATRPPSLHSNRTISSNSNNNSHL TSPLEGKGTLNGSLSRPHSESSGEFSLSLDQEVWSSSGSSPVQQPCSSRTSHQSPLQLRR PLDPGQTPGQTPGQTPGRKTGSPACEVLSLQQFLDEGIDPAESGSQENLTVDSPRLSTSS EHEQKERPVTKARGILRSASGKAAPVSSDRPPRSSGQPGRPTLRKAESTRVRGSVPLRSS LSSQGKATSVSGRLDSASSTLPRASSVISTAEGSTRRTSLHDLLSKDSRSPISVDTSPNG ASTKAGVRSQPTPSEYHPSSTNLKGPLTTTMPKSLSLPCHSLEDPDLSTLESFLGPSFTV ESVFMDSIFSESVCKTHPFLSLNPSLVSNISGPPVTNKTHSPPPPPPPIPSPNEPHSQSN GQMRSSPASVTEINEGLDPSGENNLEQSLNAEDNQSLWYEYGCV NT seq 6075 nt NT seq  +upstreamnt  +downstreamnt atggaaagcgaggttttcaccccttcgctggagcagtttatgctcacgcctctggtctgc tgggtgaagacagtcggccaggcgacactgaccgatggcacccaattatcggaatatatc gaattagtggatgggatttacctgaacgagataatgcttgagataaatcccacggccacg gtgcagaggaccaacaagaaggtgaacaatgacccgacactgcgcatccagaacctttct attctcatcaggcagattaaagactactatcaggaaactctccagcagctggtgatgatg cctttaccaaacgtgctgattctgggcaaaaaccctctctctgaacaaggtctggaagag gtgaaaaaactgttgctgctgctactagggtgtgctgtccagtgtgagaaaaaggaagag tacatcgagtgtatccagactctggactttgacaccaaagctgccatagcatcccacatc caagaggtcacccataatcaggagaacgtagtggacatgcagtggttggaaagtggggaa atgcctcctgaagacctggacagcctctccagaaacctggctttccacctcaaacgcctg gtggacgagagggacacacagctggagactatagtggagttgacccaggagagagactgt gtccagctctcccctctggcttcctgtcagacccagtctcctggtgactcccccgggatg aggaggaccgagagccggcagcacctctctgtggagctggctgatgccaaagccaagatc agacgccttcgacaggaactagaggagaagagcgagcagcttttggacaccaggcaggag ctggataacagtgaaggcgagctcaagaagcttcagcaggagagctaccagttgctgtcg gacgctcggtcggctcgggcctaccgtgacgagctggacgcgctcagagagaaggcgatc cgtgtcgacaagctagagagcgagctgagccgatacagggagagacttcacgacatcgag ttttacaaggccagagtcgaggagctgaaggaggacaaccaggtcatgttggaaactaag agcatgttggaggagcagctggatgctagcaggcagcgctccgacaaactgcacctcctg gagaaagagaatctgcagctgaattccaagatccatgacctggagatggagcgggacatg gaccgtaaacgcatggaggagctgctggaggagaacctcgtgctggagatggctcagaaa cagagcatggacgagtccctgcacctgggctgggagctggagcaactgtccaagacccca gatctcaccgaagcccctcagaagtctctgggcgaggaggtgaatgagctgacctccagc cgcctgttgaagctggagaaagacaaccagagcctgctgaagactgtggaggagctccga ggaacagccagtcaggacaccgtgaccaaactgtccaaagccagccaggagaaccagagg ctgaaccacaaactggagcagttggcgagtgaactgacctcagaccgagactcgctccgc agcgcagagtctctcagtactgacctgatgaaggagaaggctttactggagaagactctg gaaacactcagggaaaactctgagagacagctgaagggtctggagcaggagaacaaacac ctgggtcagacggtgtcgtctctgcgtcagcgctcccaggtcggagctgaagcccgggtg aaggacgtggagaaagagaatcgagttctccacgagtccatctgcgagaccaccgccaaa ctcaataagatggagtttgaaaggaaacaactacgaaaggagcttgaagtggtgaaggag aaaggagagagagcagaagagctggagatccagattcagaagctggagaagggcaaggag agcctgcagaagaagatttccagtcttacaatcacctgtgaaaaggtgtgttctttggag aaggagaactcagagctggcggcagagggccgtcgtctgaagaagaagctggatactctg aagaacatggccttccagctggaggctctggaaaaggaaaactcccagctggagcatgaa aacctggaggttcggcgcttggcggagagtctccggtcatcgggagcaaaggccgctcag ctggaggcagaaaacagggagctggagagcgagaggagccagctgaagcgcagcctggag ctgctcaaagcctcgtccaaaaagacggagagattagaggtgagttaccagggcctagat acagagaaccagcgcctgcagaaggctttagagaacagcagcaagaagattatacagttg gaggctgagctgcaggaggtggagactgagaatcaaagcctccaacgcaacctggaggag ctcaagatctccagcaagcgcctggagcagctggagcaggagaacaagtgtctggagcag gagagctcccagctggagaaagacaagaagtacctggagaaggagaacaagaggctgagg cagcaggccgagatccgagactccaagctggacgacgacaaccagcgcatcgtcaccttg gagaaagagaatcggacgatggggaaggagatgatcttcttcagggactcgtgcacaaga gtcaaagacctggagagggagaacaaggagctggtcaaaataagcaacatcgataagaag accctcaacaacctcagagaggagcttgtgagtgagaagctgcggactcagcagatgcat aatgatctggagaaactcactcatgagttggagaagattggcctgaacaaggaaaggctg ctgcatgacgagggctctgacgacaggtttaggctcctggaaacaaaactggagtcgaca ctgaaatcatctctggagattaaagaggagaagatcgcagcgctagaggccagactgcag gagtcctccaacctcaaccagcagctacgccaggagctcaagacggtaaagaaaaactac gaggcgctgcgtcagagggaagaggaggagaggatggtgcagagctcccccccgagagga ggggaagcccctcaggctgtcagtaaatgggagaaagagagtcatgaaaccaccagagag ctgctgaaagtcaaagacagactcattgaggtggagaggaacaatgccacgctgcaggct gagaaggcggcgctgaggagccagctcaaacaactggagactcagagctccaacctgcag gctcagatagtggcggtgcagaggcagaccgcgtctctccaggagaacaacacgtcactg cagactcagaacgccaagctgcaggtggagaactccactctgagctcgaagagtggcgcc ctcatggcccagaatgcccagctgcagacccagcagagcagcgtggagggggagcgagaa ggagctctgaaggacaaagaggagctgaggtccacctacgagctgctcctccgagatcac gagaagctggcagcgctccacgagaggcaggcgtccgagtacgaagccctgatcggaaaa catggcggcctgaagacctcccacaagagcctggagcagcagcacagggacctggaggac aagtacaagcagctcatgcagagaaagggagagctagaggatctggagaaaaatctgaag gagcagcaggagaaaatggcgctggagaatcaaacgcaccgatccacagctgaccagttc aaactgctcaaagaagaaaatgataggctgaataatacccatcgtcagctggtgaaggac aacgacaacctccagctggaccataagaacacaaagacccagctgaacagcgccaagctg gagcagaccaagctagaggccgagttctctaaactgaaggagcagtaccagcagctggac atcacctccagcaagctgaccaaccagtgtgagttgttgagccaggtaaaaggaaacctg gaggaggagaatcgccacctgttggaccagatccagactctgatgctgcagaaccgcaca ctgctggagcaaaccatggagagcaaggacctgtaccacgtagagcagagacaatacata gacaagctgaatgagctgaggagacagaaagagaagctggaggagaagatcatggaccag tacaagttctacgacccctcgcccccacgcaggcgtggaaactggatcacttcgaagatg aaaaagttgatcaagccgaagagccgggacaggttgcgctctctcacgctgactccctct cgttcagagtatggcgacggtttcctgacgcttcctcaggactgccaggacagctcgtcc atcggctctggctccaactcgctggacgacacactcacacagaagaagagcagcaggagg agagggcagcaggcccatgcccaagggcagggttcaaccaatgctttaaaaaggttgcct ttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctccatg tccatgaacgacctgctgcagaccatggcggtggcgggtggtcccggcgctgagtgggcg agcagcatcgaccacctggacggagctgaggccggagacagagacatggcggggagcagc cggcgcagcgggcggagcatgaaggaactcaccttctccaccaacaccatcgactacgcc acgctcaccctgcccaccgccaggcagagcagggccaagctccgcctccaggtcaaagat aatgcttcatgtgaggatgtcgccggctccttagatgaccccaagattcaagccacaaga ccccccagtctccatagcaacaggaccatcagtagtaatagtaacaataactcccacctc acctctcctctggagggcaaaggcacgttgaatggcagcctgagccggccccacagtgag agcagcggggagttcagcctgagtctggaccaggaggtgtggtccagcagcggcagcagc ccggtgcagcagccctgctcctccagaacctcccaccagagccccctgcagctgaggagg cccctcgacccgggacagaccccgggacagaccccgggacagacccccggcaggaagacg gggtccccagcctgcgaggtgctgtccctgcagcagttcctggacgagggcatcgatcct gcagagtctggcagtcaggagaacctcactgtggactccccccgcctctccacctcttct gagcatgagcagaaggagcgtcctgtcacgaaggcccggggcatcctccgctccgccagc gggaaagcggcgcccgtcagctccgaccgtcctccgagatcctccggtcagccgggccgc cccacgctgcgtaaggctgagagcacccgggtgaggggctccgtgcccctccgctcctcc ctgtcgtcgcagggcaaagcgacgtccgtgtcgggacgcctggactccgcctcgtccacc ctgccccgcgccagcagcgtcatctccaccgccgagggctccacgcggcgcaccagcctc cacgacctgctctccaaggacagccggtcccccatctccgtggatacgtctcccaacggc gcctccactaaggctggggtccgctcccagcccacacccagtgagtaccacccctccagc accaacctaaagggaccccttaccaccaccatgcccaagtcactcagcttaccttgccat agcttggaggaccccgacctctccaccctcgagtccttcctcggcccctccttcactgta gagtccgtgttcatggattccatctttagtgagtcggtgtgcaaaacccaccccttcctg tctctaaacccctccctagtcagcaacatcagcgggccccctgttacgaataaaacacac tctcctcctcctcctcctcctcctatcccctccccaaacgagcctcacagccaatcaaat ggccagatgagatccagcccagccagtgtgacagaaattaacgagggccttgatcccagt ggtgagaataatttggagcagtcactgaacgcagaggacaaccagtctctgtggtatgag tacgggtgtgtgtga

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