Trematomus bernacchii (emerald rockcod): 117499726
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Entry
117499726 CDS
T09643
Symbol
hpse2
Name
(RefSeq) inactive heparanase-2
KO
K07965
heparanase 2 [EC:3.2.1.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00531
Glycosaminoglycan degradation
tben01100
Metabolic pathways
Module
tben_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117499726 (hpse2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117499726 (hpse2)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Enzymes
117499726 (hpse2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
117499726
NCBI-ProteinID:
XP_034008200
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MPKSSPCAFPWSSLWLASLATLVVQSVLSSSYSSSSTYQRSAADGKRPGFMERTLVLLDV
NTRSPIRVLNDNFLSLQLDPSIIKDGWLDFLSSKRLVTLARGLSPAFLRFGGKRTDFLQF
NNQKNLAKFRGPGPDYYLKNYEDDIVRSDIALDKQKGCKLANHPDIMLELQREKAATTQL
VLLKEQLSNIYSNITITARSLDKLYNFADCAGLHLILGLNALHRNPDNSWNTSSTLSLLK
YGAGKKYNISWELGNEPNAYRSMVGRAVNSTQLAQDHTKLRTLLQSVRYYHRAHLYGPNA
GRPRKNAILLLDGFMKNAGSVVDAVTWQHYYMDGRVNKVEDFLKTRLLDTLTEQINKVTK
VVNTHSPGKKVWLGGLGPAWAGGINNLSDTYAAGFLWVNALGMAAVQGIDVVLRHSFFDY
GYTHLVDQNFNPLPDYWFSLVYKRLVGPRVLAVRVAGLQRKPQPGRVIRDKLQIYAHCTS
YYNHNYVRGSITIYIINLHRSRKKIKLAGTLRNNIVHQYLLQPYGTDGLRAKYVQLNGEK
LLMVDNETFPELKPKTLRAGRTIAMPPMTIGFYVIKNINAYACRR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaatcctcaccgtgcgcattcccatggtcctccctgtggctggcatctttggct
actttggttgtgcagtcggtgctctcttcctcctactcttcctcctctacatatcagaga
tctgcagccgatgggaagcgacccggcttcatggagaggacgctggttctcttggatgtc
aacacccgcagtccgatcagagtcctcaacgacaacttcctttctttgcagctggacccc
tcgatcatcaaggacgggtggctggactttctaagctcaaagcggctcgtgacactcgcg
cgcggcctgtcgcctgcctttctgcgtttcggggggaagcggaccgacttcctgcagttc
aacaaccagaagaacctcgccaagttcagagggccggggccagactactatctgaagaac
tacgaagacgacatagtgcgcagtgacatcgcattggacaaacagaagggctgcaagttg
gccaaccaccctgacataatgctggagctgcagagagaaaaggccgccaccacacagctc
gtcctgctgaaggagcaactgtccaacatctacagcaacattacaataacagccaggtct
ttagacaaactgtacaactttgccgactgtgctggtctgcacctgatcctggggctcaac
gcgctgcacagaaacccagacaactcctggaatacctcctccaccctgagtctcctaaag
tacggcgctggaaagaagtacaacatatcctgggagcttggaaacgagcctaacgcgtac
cgcagcatggtgggtcgagcggtcaacagcacgcagttggctcaggaccacaccaagctg
cggaccctgctgcagtctgtgcgctactaccaccgagctcacctctacggccccaacgca
ggtcgaccccggaagaacgccatcctgctgctggacgggttcatgaagaatgccggctct
gttgtagatgcagttacgtggcaacattattatatggacggcagagtgaacaaagtggag
gacttcctaaagacccgtctgttggacacactgacagagcagataaataaagtcaccaag
gttgtgaacacacactctcctggtaagaaggtgtggctgggtgggctcgggccggcgtgg
gcaggaggcatcaacaatctctccgacacatacgctgctggctttctgtgggtgaacgcg
ctgggaatggctgctgtgcaggggattgatgttgtcctgcgtcactcgttctttgactac
ggatacacacaccttgtggaccagaactttaaccctctacctgattactggttctctctg
gtctacaagcgtctggttggtccgagggttttagccgtgcgggtggctggactgcaacgg
aagccacaaccaggacgagtcatacgggacaagctgcaaatctacgcccactgtaccagc
tactacaaccataactatgtgagagggtccataacgatctacatcatcaacctgcatcgg
tcgcgaaagaaaatcaagttggcggggacattacggaacaacattgtccatcagtacctg
ctgcaaccctacggcactgacggactcagagccaaatatgtccagctgaacggggagaag
ctgctcatggtggacaatgagacatttcccgagttaaagcctaagacattgagggctgga
cggacaatagccatgcctcccatgaccattggcttttatgtcatcaaaaacattaacgca
tatgcctgccgaagataa
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