Trematomus bernacchii (emerald rockcod): 117499791
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Entry
117499791 CDS
T09643
Symbol
nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117499791 (nphp1)
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117499791 (nphp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
ANAPC15
RXT2_N
Sigma70_ner
SH3_3
SH3_10
BUD22
Motif
Other DBs
NCBI-GeneID:
117499791
NCBI-ProteinID:
XP_034008311
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MPPKRKGPLQLVQREVDEIKKQVDSLVKDVESGNGYTEEAFRRCQELQMSAEKTQRTLIK
LTKADELAPVGNYDQRKQEEERRLQDILERVTTLSLELSPAGPSTAAGDASKEDSDDDDK
DEDDDEDSSDEDTDDDDEVENQAVKTPSQMYTALSDFKGEQEGDLSVQRGEILKIIRKTA
DGWWLAQDTKGNTGLVPKTYLKIGSGVDDDDDEKDEDDDDENDDEESEEEEDGEELADDQ
EKQSSHSNWSTVKKALSGLDATDVLSALGAIPAGFGTSHLTKLLEEEGQTYRGSHYVQPE
LSQSQLSFSDLFLDPDTGRVRPRQVQTCLCFSLWSCRMIPTPGVGVQVLSRHIRLCAFDK
TQVLSNIHTVRATYNSKSPKTWSFSPRMTGILPSLLDGDCFLRCNSAHPNLGILFELGVT
FIRNSTGDRGNLSCGWAYLKLTDDSGNPLPNRTYELTLNSGSPFEAEVPMEIAATRGSPA
SVFQQMLQARRLPKLIIKLKSANSRTRTQLSILPDTLLHSLSCVHLLALHRQLLADTLLM
DRSTMQNADLICSPILSTFPVLFDQPDLLDALRSAWLEAETSMSRAQKRDLPYLKQEFVK
VYMSSVYFLLHSPSLPPHRLADPPSEEQRARVLFSTLDALKQSQHTSGTSGGLEVFVDPE
HQHHAFDITELTFDLLNMAR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgaaaagaaaaggacctttgcagctcgtccagagagaagtggacgaaatcaaa
aaacaggttgacagtcttgtgaaggacgtggagagtgggaatggatacactgaagaagca
tttcggagatgtcaagaactgcaaatgtcagcagagaagacacaaagaacactgattaaa
ctgaccaaggcggatgagctggctccagtggggaactatgatcagaggaaacaggaagag
gagaggcggctgcaggacatcttggagcgtgtaaccacactgtctctggagctctcacct
gcaggacccagtactgctgcaggggatgcctcaaaggaagatagcgatgatgatgataag
gacgaagatgatgatgaagacagtagcgatgaggatactgatgacgatgatgaagttgag
aatcaagctgtgaaaactccctctcaaatgtacacagccctcagtgatttcaaaggagaa
caggagggtgatctgtctgtgcagaggggggagatattgaagatcatcaggaagacagca
gatggatggtggctggctcaggacactaaaggcaacacagggctggttccaaaaacctac
ctgaagattggctctggtgttgatgacgatgatgatgaaaaggacgaagatgatgatgat
gaaaatgatgacgaggaatctgaggaggaggaagatggtgaagagctggctgatgaccaa
gagaaacagagttctcattccaactggagtactgtcaaaaaggctttgagtgggctcgat
gcaacagatgtgctctcagcattgggggctatacctgccggattcggaacatcacatctc
accaaactgctggaggaggaaggtcaaacatacagaggaagtcactacgtccagccggag
ctcagccaatcacagctctcctttagtgacctcttcctggatccagacactggcagggtt
cgtcctcggcaggtccagacttgcctttgtttcagtctgtggagctgcaggatgattcca
actcctggggttggagttcaagtcctcagcagacacatccgcctctgtgcctttgataaa
actcaagtgttgagtaacatacacactgtgagggcaacgtacaactccaagagccccaag
acctggagcttctctccaaggatgacaggtatcctaccctccctcctcgatggggactgt
tttctacgctgcaactcggcacatcctaacctcggaatcctctttgaactgggagtcacc
tttatacgcaattccacaggtgacagagggaacctgagctgcggctgggcttatttaaaa
ctgaccgacgacagtggaaatccactccccaacaggacctatgagctgactctgaatagt
ggctctccatttgaggcggaggtcccgatggagattgcagccaccagaggatctccagct
agtgttttccagcagatgcttcaggcacggcggctgcccaaactcatcataaagttgaaa
tcagccaacagcagaaccagaacacagctcagtatccttccagacactctgctgcactct
ctgagctgcgtgcacctgctggctctgcacaggcagctgctggcagacactctcctgatg
gacaggtctaccatgcagaacgcagatctgatatgcagtcctatactctctaccttcccc
gtgctgttcgaccaaccagacctgctggatgctctcaggagtgcttggctggaggctgag
accagcatgagcagagcgcagaagagagacttgccctatttaaaacaggagtttgtcaaa
gtctacatgtcctccgtgtatttcctgctccactcgccctccctgcccccccaccgcctg
gcggaccccccctcagaggagcagcgggccagagtcctcttctccaccctggacgctctc
aaacagagccagcacaccagcggcacatctggaggtctagaggtgttcgtcgaccccgag
catcagcaccacgcctttgatatcacagagttgacctttgacctcctcaatatggcacgg
tga
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