Trematomus bernacchii (emerald rockcod): 117499844
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Entry
117499844 CDS
T09643
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117499844 (dhx32b)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117499844 (dhx32b)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117499844 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
117499844
NCBI-ProteinID:
XP_034008384
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MEQDITGLTGEEYTERISPCCSDSETLSQRDTENDDILELNQFDGLPYSSRFYKLLRERK
ELPVWDAKCEFMDTLAKGRFVIVSGSAKTGRSSQIPQWCAEFCLSVQFQHGMVVCTQIHA
QQAVDLALRVADEMDVNIGHEVGYSIPLEACSHNDSVLRYCTDDMLLREMMSDPLLERYG
VIVVDQAHQRAVATDVLQGLLKDVALQRPELRVVLLTAVDPDPKQLVHFSGSAAPLIRLR
SPGAGAGVHSSTGDGYFCSALRLVLEIHRSEEEGDVVVFLVTTQEIDLAHDILCHEGQSV
PPELGDLLPVAVHPGRPGNLPLLEEGGAARTRRVFLTSSPNEDFFWAVGSINFVIDAGLE
KRNVYNPRIRTNSVLIQPISTGQAESRKQLTGPKGKCFCLYPKDRQLPVQIRPRLVESDI
TSTVLFLKRMEIAGLSHCDFIDRPDPGGLMQALEELDYLAALDDDGNLSAMGIIMSEFPL
EPQMAKTLLASCEFDCFSEVVIIAAMLTAPTCFIVPSADMKPEATQSHMKFQHPEGDHFT
LINIYKAFKQSQQNPCCNEEKWCQDSFLSHASLLMADALSSELTDTLKRIELPTSLPAFG
SRSNTFNIKRALLAGFFMQVAQDVDGSGNYLILTHKHVAQLHPLSGYGARTPKLGLPEWV
LFHQHSFSEDNCLRTVTHTTPEEFIQMAPQYFFYNLPQSESKDILQNILNHQYQKEKPAT
SQEEPQEDRTSDRCVVQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacattactggtttaactggagaggagtataccgagaggatatcaccctgt
tgttcagattcagagactctgagtcaacgagacactgaaaatgatgatattttggagctt
aatcagtttgatggactgccttattcctccaggttttacaaattgctgagggaaaggaaa
gagctgccagtgtgggatgcaaaatgtgaatttatggacactttggccaaaggacggttt
gtcattgtcagtggctctgccaaaactggaagaagttctcaaatcccccagtggtgtgct
gaattctgcctgtcagtccagttccagcatggcatggtggtttgtacgcagattcacgcg
cagcaggctgtagatctcgccctgagagtggcagatgagatggacgtcaacattggtcat
gaagtcggatacagcatccctttggaagcatgttcccacaatgactcagtcctaaggtac
tgcactgacgacatgctcctgagagagatgatgtcggaccctctgctcgagcgttacgga
gtcatcgtggtggaccaggcccaccagagggccgtggccaccgacgtgctgcagggtctt
ctgaaggacgtggccctgcagaggcctgagctccgggtcgtcctactcacagccgtggac
cccgacccgaagcagctggtccatttcagcgggtcagcagcgcctctgatccgcctgcgg
agcccgggcgcaggggcgggggtgcacagcagcacgggggacggatacttctgctccgct
ctccgcctggtgctggagatccaccgctcagaggaggaaggagacgtggttgtgtttctg
gtgacgacacaggagatagatctggcccatgacatcctgtgccatgaggggcagagtgta
ccccctgagctgggggacctcctgcccgtcgctgtgcaccctggtcgccctgggaaccta
ccgctcctagaggaggggggggcagcccggacccgcagggtgttcctcacatccagccca
aacgaggacttcttctgggccgtgggctccataaactttgtcattgatgccgggctggag
aagagaaatgtttacaaccccaggatcagaactaactcagtcctcattcagccaatcagc
acgggtcaagccgagagtcgcaaacagctgacgggtccaaaaggcaagtgtttctgcctg
tacccgaaggacagacagcttcctgtgcagattcgcccccgcctggtggagtctgacatc
acgtccacggtgctcttcctgaagaggatggagatcgctggactgagtcactgcgacttc
atcgacaggccggaccccggaggcctcatgcaggctttggaggagctggactaccttgca
gctctggatgatgacggaaacctctcagcgatgggcatcatcatgtctgagttccccctg
gagccgcagatggccaaaactctgctagcctcctgtgagttcgactgcttcagcgaggtg
gtcatcatcgctgccatgctaacagcaccaacttgcttcatagttccctctgcggacatg
aagccagaggcgactcagagccacatgaagttccagcacccggagggagaccacttcacc
ctcatcaacatctacaaggccttcaaacaaagccagcagaacccatgctgtaatgaggag
aagtggtgtcaggattccttcctgagccacgcctccctcctgatggcggacgctctgagc
tctgagctcacggacactctgaagaggatcgagctgcccacctcactgcctgccttcggc
tcccgcagcaacaccttcaacatcaagagagccctgctggcaggcttcttcatgcaggtg
gcgcaggatgtggatggatctgggaactacttgatcctcacccataagcacgtggcacag
ctccaccctctgtctgggtacggagccaggacccccaaactgggccttcctgagtgggtg
ctgttccaccagcactccttctccgaggacaactgcctccgcaccgtaacccacacaaca
ccagaggagttcattcagatggcaccacagtattttttctacaatctaccacagagtgag
agcaaagacatcctgcaaaacattttgaaccatcagtaccaaaaggagaaacctgcaacg
tcccaagaggaaccgcaggaggaccggacttcagaccgctgcgtcgtacaatag
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