Trematomus bernacchii (emerald rockcod): 117499894
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Entry
117499894 CDS
T09643
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117499894 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117499894 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117499894 (snx5)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Macropinocytosis
Sorting nexins
117499894 (snx5)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117499894 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
117499894
NCBI-ProteinID:
XP_034008453
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MTSTIDESNKEKMRSVSVDLNHDASLLIDIPDALCERDKVKFTVHTKTTLSSFQKPDFSV
PRQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYSKMK
QELEAEYLAVFKKTVQVHEVFLQRVSSHPMLSKDRNFQIFLEYDQDLTVRRKNAKEMFGG
FFKNMVKSADEVLISGIKEVDEFFEQEKTFLLDYYSKIKDSTAKAEKMTRSHKNIADDYI
HISATLNTLAADDSTANKKHLEKLSDLFEKLRKVEGRVASDEELKLTELLRYYMRDIQAA
KDLLYRRARALVDYENSNKALDKARLKSKDIPQAEEHQQQCLHKFDKLSESGKKELTSFK
GRRVVAFRKNLIEMAELEIKHAKNNVTLLQGCIELLKSN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaccatagacgaaagcaataaggaaaagatgcgctctgtgtcggtagatcta
aatcatgatgcctctcttctcatcgacattcctgatgcactctgtgaaagggacaaagtc
aagtttactgtccatacaaagaccacccttagctctttccagaagccagatttctctgtt
ccaaggcagcatgaagacttcatctggctacatgacactttggttgagacagaggactat
gctggtcttataattcctccagcacccccaaagccggactttgagagccccagagagaaa
atgcataaacttggggaaggtgaagcaactatgaccaaggaggagtactctaaaatgaag
caggagctggaggctgaatacctggctgtgttcaagaaaactgtccaagtgcacgaagtc
ttcctgcagagagtgtcctcccaccccatgttgagcaaagacagaaacttccagattttc
ttagagtatgaccaggatcttactgtgagaagaaagaatgccaaggaaatgtttggagga
ttctttaaaaatatggtgaagtcagctgatgaggtccttatctcaggaatcaaggaagtg
gatgaattttttgagcaggagaagacattcctgcttgactactacagcaagataaaggat
tctactgccaaagcagagaaaatgacccgctcgcacaaaaacattgcagatgattacatt
cacatctctgccactctgaacactctcgctgctgatgatagcacagcaaataaaaagcac
ctggagaagttgtcagacctgtttgagaagctcagaaaagtagagggaagagtagcatct
gacgaggagctgaagctcacagagctgctcagatattacatgagagatatccaggcggcc
aaggaccttctgtacaggcgagcccgggccttagtggactacgagaactctaacaaggct
ttggataaggctcgactgaagagcaaggacattccccaggcagaggagcaccagcagcaa
tgtctgcacaaattcgacaagctctcagagtccgggaagaaagaactcaccagtttcaag
ggcaggcgtgtcgtggccttcaggaagaatctcatagagatggctgagctggagataaaa
catgccaagaacaatgtgactctattgcagggatgcattgaactgctcaagagcaactga
DBGET
integrated database retrieval system