Trematomus bernacchii (emerald rockcod): 117499899
Help
Entry
117499899 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117499899
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117499899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
PRY
NOD2_WH
LRR_4
LRR_1
SPRY
LRR_8
DUF6063
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
117499899
NCBI-ProteinID:
XP_034008460
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MNPCEDTEPALSGDPERLTKAQSPEQQHGPGPGPGPGPGPGPGPGPGPGPGPSCVSMKSG
QSIAAPIYFKGRPSETEEDQQSSEVPRGQSAQQHQMEMDSTFMLLEENIVTFVKNELKKF
QKALSSVYPECLESHWEDEEVLDGEDEEDEEQRRSSREAFLNITLHFLRSMKQEELADRL
QSRTPAAVCQRTLKSTLKERFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVNDEHEV
RQIETASRKPDRPETTIRQEDLFKASPGRDALIRAVMTKGVAGIGKTVLTQKFTLDWAEG
KANQDIQFIFPFTFRELNVVRENKYSLVELVHHFFTETRDAGICRFDQFPVVFIFDGLDE
CRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVDMV
TEVRGFTDPQKEEYFRKRFRDQEQAGNIISHIKTSRSLHIMCHIPVFCWISATVLEEVLK
TREGGQLPKTLTEMYIHFVVVQSKVKNIKYDGGAETDPHWSPECRKMMESLGKLAFEQLQ
KGNLIFYESDLTECGIDIRAASVYSGVFTQVFREERGLYQDKVFCFVHLSVQEFLAALHV
HLTFINSGVNLLSEEPKTSQKSEVKPELTHLYQSAVNQALQSPNGHLDLFLRFLLGLSLQ
TNQKLLQGLLTQTGNSSKTNKKTVQYIKNKMDEDLSPERSINLFHCLNELNDRSLVEQIQ
QSLSSGSFSTNNLSPAQWSALVFILLSSEEDLDVFDLNKYSASEEALLRLLPVVKASNKA
LLSGCDLSERSYEALSSVLSSQSSSLRELDLSSNDLQDSGVKLLSAGLESPHCTLETLRL
SGCNLSARSCEALSSFLSSQSSSLRELDLSNNNLQDSGVKLLSAGLESPHCTLETLRLSG
CNLSEISSEALSSFLSSQSSSLRELDLSNNDLQDSGVKLLSAGLESPHCTLETLRLSGCL
VTEEGCVFLASALRSNPSHLRELDLSYNHPGDSGEKLLSAGLDDPFWRLDTVRMVPGGVR
WLRPGLRKYYCELTLDTNTAHRNLKLSDNNRTVTCMEEEQQYPDHPERFDIFHQLMCRGA
LTGCCYWEVELRGGVLISVTYRGISRRGERDDCVFGWNDQSWSLSCSDGHYSVLHNKRRT
HTSSSSSCSSSSGRVAVYLDHPAGSLSFYRVSSDTLIHLHTFRTTFTKPLYAGFFVWPGS
SVSLCPL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctgtgaggacactgaacccgctctgagtggggaccctgaacgcctcaccaaa
gctcagagcccagagcagcagcatggacctggacctggacctggacctggacctggacct
ggacctggacctggacctggacctggacctggacccagttgtgtctccatgaagagtggc
cagtctatagctgcaccaatatattttaaaggccgaccttcagagacagaagaggaccag
cagagctcggaggttcccagaggtcagtctgcccagcagcatcagatggaaatggactcg
acatttatgctgctggaggaaaacatcgtcacttttgtgaagaacgagctgaagaagttc
cagaaggctctgagttcagtttacccagaatgcttagagagtcattgggaggatgaggag
gtgttggacggtgaggatgaagaggacgaagagcagaggaggagcagcagagaggcattt
ctgaacatcacactgcacttcctgaggagcatgaagcaggaggagctggctgaccgtctg
cagagcagaactcctgctgcggtgtgtcagcgtacacttaaatccaccctgaaggagagg
ttccagtgtgtgtttgagggcattgctaaagcaggaaacccaacccttctgaaccagatc
tacacagagctctacatcacagagggggggtctgcagaggtcaatgatgaacacgaggtc
agacagattgaaacagcatccaggaaaccagacagaccagaaacaaccatcagacaagaa
gacctctttaaagcctcacctggaagagatgcactaatcagagcagtgatgacaaaggga
gtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaaggc
aaagccaaccaggacatccagttcatatttccattcaccttcagagagctgaatgtggtg
agagagaacaagtacagcttggtggaacttgttcatcacttcttcactgaaaccagagac
gcaggaatctgcaggtttgatcagttcccggttgtgttcatctttgacggtctggatgag
tgtcgacttcctctggacttccacaacactgagatcctgactgatgtcacagagtccacc
tcagtggatgtgctgctgacaaacctcatcagggggaagctgcttccctctgctcgcctc
tggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgtggacatggtg
acagaggtccgagggttcactgacccacagaaggaggagtacttcaggaagagattcaga
gatcaggagcaggccggcaacatcatctcccacatcaagacctcacgaagcctccacatc
atgtgccacatcccagtcttctgctggatctctgctacagttctggaggaggtgttgaaa
accagagagggaggacagctgcccaagaccctgactgagatgtacatccacttcgtggtg
gttcagtccaaagtgaagaacatcaagtatgatggaggagctgagacagatccacactgg
agtccagagtgcaggaagatgatggagtctctgggaaaactggcttttgagcagctgcag
aaaggcaacctgattttctatgagtccgacctgacagagtgtggcatcgatatcagagca
gcctcagtgtactcaggagtgttcacacaggtctttagagaggagagaggactgtaccag
gacaaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtc
catctgaccttcatcaactctggagtcaacctgctgtcagaagaaccaaaaacctcccag
aagtctgaagtcaaacctgaactaacacatctctaccagagtgctgtgaaccaggcctta
cagagtccaaacggacacctggacttgttcctccgcttcctcctgggtctttcactgcag
accaatcagaaactcctacagggcctgctgacacagacaggaaatagctcaaaaaccaac
aagaaaacagtccagtacatcaagaataagatggatgaggatctgtctccagagagaagc
atcaacctgttccactgtctaaatgaactgaatgatcgttctctagtggagcagatccaa
cagtccctgagttcaggaagtttctccacaaataatctgtctcctgctcagtggtcagct
ctggtcttcatcttactgtcatcagaagaagatctagacgtgtttgacctgaataaatac
tctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcatccaacaaagct
ctactgagtggctgtgacctgtcagagagaagctatgaagctctgtcctcagtcctcagc
tcccagtcctctagtctgagagagctggacctgagtagcaacgacctgcaggattcagga
gtgaagctgctgtctgctggactggagagtccacactgtactctggagactctcagactg
agtggctgtaacctgtcagcgagaagctgtgaagctctgtcctcattcctcagctcccag
tcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcaggagtgaag
ctgctgtctgctggactggaaagtccacattgtactctggagactctcagactgagtggc
tgtaacctgtcagagataagcagtgaagctctgtcctcattcctcagctcgcagtcctct
agtctgagagagctggacctgagtaacaacgacctgcaggattcaggagtgaagctgctg
tctgccggactggagagtccacactgtactctggagactctcaggctctccggctgtctg
gtcacagaggaaggctgtgtttttctggcttcagctctgagatccaacccctcccatctg
agagagctggacctgagctacaatcatccaggagactcaggagagaagctgctgtctgct
ggactggatgatccattctggagactggacactgtcaggatggtgcctggtggagtccga
tggttgagacccggtctgaggaagtattactgtgaactcacactcgacacaaacacagca
cacagaaacctcaaactgtctgacaacaacaggacggtgacatgtatggaagaggagcag
caatatcctgatcatccagagagatttgatatctttcatcagctgatgtgtagaggagct
ctgactggttgctgttactgggaggtcgagttgagaggaggggttcttatatcagtgact
tacagaggaatcagcaggagaggagagagagatgactgtgtgtttggatggaatgatcag
tcctggagtctgagctgctctgatggtcattactctgtcttgcacaataagagaagaaca
cacacctcctcctcctcctcctgctcctcctcctctggtagagtagcagtgtatctggat
catcctgctggctctctctccttctacagagtctcctctgacacactgatccacctccac
accttcagaaccacattcactaaacctctttatgctgggttttttgtttggcctggttcc
tcagtgtctctgtgtcctctgtag
DBGET
integrated database retrieval system
