Trematomus bernacchii (emerald rockcod): 117499925
Help
Entry
117499925 CDS
T09643
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117499925 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117499925 (lrit1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
LRR_14
C2-set_3
C2-set_2
LRR_EndoS
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
117499925
NCBI-ProteinID:
XP_034008512
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MFLVLLLGLYLGTGELFSPVSSCPSQCSCFYHNLSDGSKARSVICNDPEISLVPVGFPVD
TSKLRIEKTAIQRIPSEAFIYLSSLEFLWMSFNTLSALSPDSFRGLLNLEELRLDGNALT
AFPWDSLMDMPSLRLLDLHNNQLTSLPAEATTYIKNLTYLDLSSNSLLTLPAEVLSTWLV
AKPVQGPESSKMILGLHDNPWVCDCRLYDLIQFQKSPTLSVAFIDTRLRCSAPESVSGVL
FSDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLTWRKADGRQLNGTVQQE
TSKEGITWSILSVPAVSYRDSGKYICKATNYAGNAEAVISLVVSNSPKPEGNQTSNDKKA
KVKKPNPVGKAAYQEKLVARYVVPTSTPSTLPALDPGLPTGLGPDPGLASYSLADRATLG
PATSSNPDALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVFIEGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATSTQRLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKTKDIQDSYVTFE
TLSPGTKAKGLEGEYLNRVNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgctcctggggctttacttgggcacaggtgagcttttctccccagtg
agctcctgcccgtcgcagtgcagctgtttttaccacaacctgagtgatggatcaaaggcc
aggagtgtgatctgcaatgatcccgagatatctcttgtgcctgtcgggtttcctgttgac
acgtccaaactgcgcattgagaagacggccatccagcggataccgagcgaagccttcatc
tacctctccagtctggaattcctgtggatgtctttcaacacgctctccgccttgagcccg
gacagtttccggggactgctcaacttggaggagcttcgtctggacgggaatgccctcacc
gcctttccttgggactctctgatggacatgcccagtctcagacttctcgatttgcacaac
aaccagctcacctcgctgccagcggaggccaccacttacatcaagaacctcacctacctg
gatctgtccagcaacagcctgctgaccctgccggcagaggtgctgtccacctggctcgta
gcaaaacctgttcaagggccagagagctccaagatgatacttggtctccacgacaacccc
tgggtgtgtgactgtcggctctacgacctgatccagttccagaagtctcccactctctct
gtggcgttcattgacacaaggctccggtgttcagctccagagagtgtatccggggttttg
ttcagtgacgcagagcttcggcgctgccagctcccacgtatacacacagctgtggcacgt
gtccggagcgctgttgggaacaatgtgctgctgcgctgtgggaccattggagtccccatc
ccagacctgacatggcgcaaggcagatgggaggcaacttaatggaacagtccagcaggag
acctcaaaagagggaatcacttggtccatcctcagtgtccctgctgtgtcctatcgggat
tcggggaaatacatctgcaaggccactaactatgcgggaaatgctgaagctgtcatttct
cttgttgtctctaactcaccaaaaccagaggggaaccaaaccagcaatgacaagaaagcc
aaagtcaagaaacccaaccctgttggtaaagctgcctaccaggagaaactggtggccaga
tatgtggttccaacctcgaccccttcaaccctgcccgccctggatccaggccttccaact
ggtcttggtcctgatccgggactagccagttacagcctggcggacagagccaccctgggg
cctgccacctcctccaacccagatgcactgttggatctggagaagactaatctaagcaac
ctggcggccaacacgtcatcactgcagcaggaccccgacagggtggtccgctcagtaaag
gtggtgggagacacagacaatacaatttctttgaactggagagcccctaaggccaagaac
acaacagcgtttagtgtgctgtatgctgtgtttggagagagggacatgaggaagatcaat
gttggggcagggcaaaaccgtgtattcatcgaaggcctggtgcccagaaccaagtacatt
gcttgtgtttgtgtgagggggctgatccccaagaaggagcagtgtgtgatattttccact
gatgaagcagccagtgcaacttcgacccagaggctgattaatgtgattgtgatcacggtg
gcctgtatcatcgcagtcccgctcactgtcatcgtgtgctgcggggctctgaagagacgc
attcaaaagtactggggaaagaaaaccaaggacatccaagattcatatgtgacctttgaa
acactgtcgcctggtacgaaggccaaagggcttgagggtgagtatttgaacagagtgaac
ccagaggaatcaaacaggcttctgtcggcccgatccagcctggactctgaggccacggct
aagatagagggacaacctaacgagtacttctgctga
DBGET
integrated database retrieval system
