Trematomus bernacchii (emerald rockcod): 117499994
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Entry
117499994 CDS
T09643
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
S1
HHH_9
Tex_central_region
HHH_7
YqgF
RNase_II_C_S1
S1_RRP5
HHH
Motif
Other DBs
NCBI-GeneID:
117499994
NCBI-ProteinID:
XP_034008606
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MMRRPRTTTAKVVENTEDSDLSISTILISDEDRDEWTPAEPKLKAPTTTARAPAVPMMRR
PRTTTAKVVENTEDSDASISTILISEEDSDEWTPAEPKLKAPTTTARAPAVPGEKKAAPK
RTAKPKEPKAPKQPKPPKEPKVPKPRAPRKTAAERKTQASKVVKGSRTSVLAGTKRKNID
EGKNDDKAAEKKEEKHTDCGPSTKMKKERVSFIVSEANQADMWAGEGTSLAGFIAKKEEV
EDFTFDEPCLKKQKTGGAFLGQPSALPSSTANTLRNELNMNWDFIEVLSTRTCVEWRVCA
NIIGLLREENTVPFMVRYRKDMINHMDADAVRDVQLVYEELSTLSKKTQSVIQTLKKDGV
LTVELEQNMRSCQSADELDHVYSPYKKGSKLTKARRAKALGLEDAASLLMNTPHTLDLRT
WVKPGTEGLSSVEEVSTGVGHILADLMAKDPETLAYVKTLCENNFVTIQSSVSKSALKEK
VQDHKKPGAKQNKKMDIDKFHLYLDFTSNIQRIQPHQTLAINRGESLKILTVKVNIPDRV
KNDFTRWCIDNRWRPKTFATEEHWAIVRSAIDDSYKRLILPFLTRNYRTKLSSAAEKESI
AMFVSNLRRCLLVGPVRGCVILGVDPGFRHGCKLAVLSPTGQIIHTDVVYLHNTGQQREV
DKLRHLMMTYSCTNVVIGNGTACRETESVFADLISRRCFHPLDVSYCITSEAGASIYSVS
PEAVKELPDMDPNLRSAVSIGRRVQDPMAELVKIDPKHIGIGTYQHDVSAGALKVALDGV
VQECVSFVGVDINICSETLMRHVAGLNAGRAKSIAEWREQNGPFNNREQLKLVKGMGPKT
YQQCTGFIRINPQTLHSAKSSPHPVPEKPAAKKSKAKTCVNIPTSFNPLDQTCIHPESYH
VAERFLSLVGGSADQIGSAGLRQCVERKVQTSSVEELAKTVDSTPETLKLIIDGLTQAPG
FDIRQSFGQADFKRGIVSMSDLRVGAVLTGRVENASLFGAFVDIGVGRSGLIHKSKITLD
KLPASERRRSLALGPGQRVEVRVLNVDPQRGRIGLDLIRVLQ
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaagacctcggacaacaactgccaaagttgttgagaacactgaggattccgac
ttgtccatttccaccatactgataagtgatgaggatagagatgaatggacaccagcagag
ccaaaacttaaagctcccactactacggcccgagctcctgcagtacccatgatgcgaaga
cctcggacaacaactgccaaagttgttgagaacactgaggattccgacgcgtccatttcc
accatactgataagtgaggaggatagtgatgaatggacaccagcagagccaaaacttaaa
gctcccactactacggcccgagctcctgcagtacccggggagaagaaagcagctcccaag
agaactgctaaacctaaggagccaaaagcacccaaacaacctaaacctcctaaagagcct
aaagttcctaagccaagagcaccacgtaaaactgcagcagagcgaaaaacacaggcctcg
aaagttgtgaagggttccaggacatctgtgttggctggaacaaaaaggaaaaatattgat
gaaggcaaaaatgatgacaaggctgcagaaaagaaagaagaaaaacatacagactgtggg
ccaagtaccaaaatgaagaaagagagggtatcattcatcgtgtcagaagcgaatcaagca
gacatgtgggcaggcgaggggacatcactcgctggatttatagcaaagaaagaggaagtg
gaggatttcacgtttgatgagccttgtctaaagaaacagaagaccggtggtgccttcctg
ggacaaccaagtgctttaccatcgtccacagcaaacactctgaggaatgaactcaatatg
aactgggacttcatagaggtgctgtccacccggacatgtgtggagtggcgggtgtgtgca
aatatcatcgggctgcttcgtgaggagaacacggtgccgttcatggtccgctaccgcaaa
gatatgatcaatcacatggatgctgacgctgtccgagacgtccagctggtatatgaagag
ttaagcactctttccaagaagacccagtctgtgattcagaccctgaagaaagacggggtt
ttaacagtcgagctggaacaaaacatgaggagctgccaatcagctgatgaactggatcat
gtgtattctccctataagaaaggcagcaagctgacaaaggctcgccgggccaaagccctc
ggtcttgaggatgccgcctctttactcatgaacacaccacacactctggatttaaggaca
tgggtaaaacctggtactgaaggtctgtcatcggtggaagaagtgtctacaggtgtgggg
catatcttagcagatttgatggccaaagaccctgagaccctcgcctatgtgaaaacattg
tgtgagaacaactttgtgaccatccagtcgtctgtgtccaagtctgcacttaaggagaag
gtccaagaccacaaaaaaccaggggccaagcaaaacaaaaaaatggacattgacaagttc
cacctataccttgacttcacctccaacatccaacgcatccagccccatcagaccctggct
attaaccgaggggagagtctgaagattttgacagtgaaggtgaacattcccgacagggtg
aagaatgatttcacgaggtggtgcatcgacaacaggtggagaccgaaaacgtttgctaca
gaagagcattgggcgatcgtcaggagtgcgattgatgactcttacaaaaggcttattctg
cccttcctaactagaaattacaggactaagctgtcaagtgcagcagagaaggagtcgatc
gccatgtttgtgagtaacctccgccgctgcctgttggtgggtccagtccgcggctgtgtc
atcttgggggtggaccctggctttagacatggctgtaagctggcagttctctcccccacg
ggccagattatccatactgatgttgtctacctgcataatacaggccagcaaagagaagtg
gacaaactgcgccacctaatgatgacatacagctgtactaatgttgtcattggcaacggg
acagcgtgtcgtgagactgagtccgtcttcgctgacctcatctctaggcgctgctttcac
cccctggacgtgtcttactgtataaccagtgaggcaggagcatcaatctacagtgtgagt
cctgaggcggtgaaagagttaccggacatggaccccaacctgaggagtgcagtgtctatt
ggaagacgcgtccaagatccaatggctgagctcgtgaagattgatccgaaacacatcggc
atcggaacataccagcatgatgtgtcagccggagctctgaaggtggctctggacggcgtg
gtgcaggagtgtgtgagcttcgtcggggtggacatcaacatctgctccgagacgctgatg
aggcatgtggcaggcctaaatgcagggcgggcgaagagtattgcagaatggagagagcag
aatggtcccttcaacaacagggaacaactcaaactggtgaaaggcatggggcccaaaacc
taccagcagtgtaccggcttcatcagaatcaacccgcaaaccctacacagtgccaaatcc
tcgcctcaccctgtacctgagaaaccagcagctaagaaaagcaaagcaaagacttgcgtc
aacataccgacctcatttaaccccctggaccagacctgcattcaccccgagtcctaccac
gtggcagagaggtttctgtccctcgtgggtgggagtgcagaccagatcgggagtgcaggc
ctgcgacagtgtgtggagcgcaaggtacagaccagcagtgtggaggaactggccaagacc
gtggacagcacacctgagaccctcaaactcatcatcgatggcctcacgcaggcccccggg
ttcgacataagacaaagttttgggcaggcggactttaagaggggcattgtatcgatgagt
gatctgcgggtgggtgcagttctgacgggccgggtggagaacgcctctctgttcggggct
tttgtagatatcggggttggccgctcgggtcttatccacaaaagcaaaatcacactggac
aaactgcctgccagtgagcgccgccgcagcctggctcttggacctgggcagcgggtggag
gtccgggtcctcaatgtggaccctcagaggggacggatcgggctggacctgatcagggtc
ctgcaatag
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