Trematomus bernacchii (emerald rockcod): 117500058
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Entry
117500058 CDS
T09643
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
tben03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117500058 (zgc:193690)
03015 mRNA surveillance pathway
117500058 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117500058 (zgc:193690)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117500058 (zgc:193690)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117500058 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
SPP1_GP23-1
Motif
Other DBs
NCBI-GeneID:
117500058
NCBI-ProteinID:
XP_034008642
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MEAVKRGVLLKQHVVIGTPGTMLDWCGKYRIIDPKLISIFVLDEADVMIAMQGHRDQSIR
IHRLLPKECQMLLFSATFEDSVWGFAEKIVPDPNIIRLRREEETLDTIKQFYILCREEEE
KFSALCDLYGGLTVAQAMIFCRTRKTASWLAGRLTEEGHQVALLSGEMTVEQRADVIQRF
RTGKEKVLVTTNVCSRGIDVEQVTLVVNFDLPVDMEGNADNETYLHRIGRTGRFGRRGFA
VNMVDSERSMELIRQIQRHFNRSISRLDPGNLQEMELLIS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaggggggtgctccttaagcagcacgtggtcatcgggacccccggc
accatgctggactggtgcggtaaatacagaatcattgatcctaaactcatctccatattc
gtgttggacgaggcggacgtgatgatcgccatgcagggtcatcgagaccagagcatcagg
atacacaggctgctcccgaaggagtgccagatgctgctgttctcggccaccttcgaggac
tcggtgtggggctttgcagagaaaatagtccctgatccaaacatcatccgcctgaggaga
gaggaggagacgctggacaccatcaagcagttctacatcctctgcagagaggaggaggag
aagttctctgctctgtgcgacctgtacggagggctgaccgtcgctcaggccatgatcttc
tgccgcacccgcaagacggcctcctggctggcagggcgcctgacggaggagggccaccag
gtggcgctgctgagcggagagatgactgtggagcagagagcggacgtcatccagcgcttc
aggaccggcaaggagaaggttctggtgacgactaacgtgtgctccagaggtatagacgtg
gagcaggtgaccctggtggtgaacttcgacctcccggtggacatggaaggtaatgcagac
aacgagacgtatctccaccggatcggacgcaccgggcgtttcgggcgccgaggcttcgcc
gtcaacatggtggacagcgagcgcagcatggagctcatccggcagatccagaggcacttc
aaccgcagcatcagccggctggacccggggaacctgcaggagatggagctgctcatcagc
tga
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