Trematomus bernacchii (emerald rockcod): 117500079
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Entry
117500079 CDS
T09643
Symbol
pold3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta subunit 3
KO
K03504
DNA polymerase delta subunit 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03030
DNA replication
tben03410
Base excision repair
tben03420
Nucleotide excision repair
tben03430
Mismatch repair
tben03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117500079 (pold3)
03410 Base excision repair
117500079 (pold3)
03420 Nucleotide excision repair
117500079 (pold3)
03430 Mismatch repair
117500079 (pold3)
03440 Homologous recombination
117500079 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117500079 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tben03032
]
117500079 (pold3)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117500079 (pold3)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117500079 (pold3)
DNA replication proteins [BR:
tben03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117500079 (pold3)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117500079 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
117500079 (pold3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
117500079
NCBI-ProteinID:
XP_034008670
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MDELYLDNIDEYVNDQDKIVTYKWLSLTLGVHVNTAKQMLFHYLDHKRKESSAQLHATYL
VSGKCVDNGQASHKVSVIKEDKLEDFKSKMSLIVSVHVYSVQKALLKDSGPLYSVDYDAV
KDNMKNCSKYSAIRCAGAVPVSSVELQQTREIQRAPSPEPESKKSGMNGSAHQASKPSTK
PQKGIMGMFASKTSSKNQDNGKEVKSEQKEEAPVDDAPKSKPAVKANPMMNFFGSQAAKK
PEKTVKQEEAPPSSSSCEQKRPQPEEKTQAAVVKPKPKDNPEEVQEVKTKRVEESDSEED
KMDKKKRRRIKKPVSDSSDEDVIPDSPQQMETREPSPSPKKEIKAVSHSHQRDAEMKTRK
ILTSPEILYLLDDEGCMVTEKGYESESYSETEDDFQAAKPAPKHPVPAKLPASKPDEKKS
QKKNNANANXGSKQASIMGFFQKK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctttatttggataacatcgacgaatatgtcaatgaccaggataagatagtg
acttataaatggctgagcctcactctgggagtccatgtcaacacagccaaacaaatgctc
ttccattatttggatcacaagaggaaggagagttcggctcagctccatgccacctacctc
gtgtcaggaaagtgtgtggacaacggccaagcgagtcacaaggtgtcggttataaaagag
gacaagttggaagacttcaaatccaagatgagcttgatagtcagtgtccacgtctacagt
gtgcagaaagctttgctgaaagacagcggtccgctctacagcgtggactatgatgccgtg
aaggacaatatgaagaactgcagcaagtacagtgcgatccgctgtgccggggcagtgccc
gtgtcctctgtggagctgcagcagacgagagaaatccagagagctccttccccagagcct
gagagcaaaaagtctggcatgaacgggagtgctcatcaggcgtcgaagccttccaccaag
ccacagaaaggcatcatgggaatgtttgcgagtaagacttcttctaagaaccaggataac
ggcaaagaggttaagtctgagcagaaggaggaagcacctgtggacgatgcccccaaaagc
aagccagctgtaaaagccaatcctatgatgaacttctttgggagtcaagcagcaaagaaa
ccagaaaagactgtgaagcaggaggaagctcctccgtcgtcttcatcatgtgaacagaaa
cgtccgcagcccgaagaaaaaacacaagctgctgtcgtgaagccaaaacctaaagacaac
ccagaagaggtccaggaggtcaaaaccaagcgagtcgaggaatctgacagcgaagaagat
aaaatggacaagaaaaagagacgcaggattaagaagcctgtgtcagacagcagcgatgaa
gatgtgattccagattctccgcagcagatggaaacaagagaaccgtcgccgagtcctaag
aaggagatcaaggctgtttcacattcacatcagcgagacgctgagatgaagacgaggaag
atactgacgagtcctgaaatcttgtaccttttagatgacgaaggatgcatggtgacagag
aagggctatgagagtgagtcgtactctgaaacagaagacgacttccaggccgcgaaacca
gccccgaaacatcccgttcccgcaaaactacctgcgagcaaaccggacgagaagaagagc
cagaagaaaaataacgcaaatgcaaatnaaggatctaaacaagcttcaattatgggattt
ttccagaagaaatga
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