Trematomus bernacchii (emerald rockcod): 117500235
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Entry
117500235 CDS
T09643
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117500235
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
117500235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
117500235
NCBI-ProteinID:
XP_034008925
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTEFNDGGLEASSDSDDEDKLHIVEEEGLLETEAPPAEGAK
THGGHDYATKVLPHNGSLNGVKEEYVSEEEEEEDEEEEEEDAEKDSLVDDILQQGDTPVI
FPEAPEDEQSPAETGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSEDNY
SCSHCSYTFTYRSQLERHMIHHRGPKDQRHVSQSTGGSGGTGGTRKFKCTECSKAFKYKH
HLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVGAPPPNGVARTSIKSPPPTT
QTTPVVIAPARNILKEKTESKPLQEQLPITQIKSEPVEYECKPVTAATATSAAANGGTEQ
PAPITTLPPGVSMVVPTVGLMSPISINLNDLQNVLKVAMDGNVLRQVLGTANGLVTQGKH
GIVLQQPQHQIISLPAFVDHDGTTKIIINYSISPAAATTATTQPASLFAKTNPALLPTII
TAAAPTPTRTDRPSTPEVTDLSIVKREPESVAITDMETEAVKQTEITSAIRSNQRPKVSS
ISTCLLCDDCPDNLEALHLLQHRKAANGEAVDSAALDPSFAALLSEAGVTLEEPPVDDLL
TLLKTYFASDANPSDKELTKISESVRIPVDVVRKWFAKMNFGKNAGKYGNKTTAVSTKTQ
TMNSISEDALNQNGEAENDSSKETSNQASSQSGNSSPSDSSPLSLNTGDLVIVKSEPEDP
DAPDSQAEPLDLSLPKHIAAALETSGTPVKLQEHPLNLTCLRKEQLEGRTIYITTPQSGG
SVNVITAAQLPTLVAIASQGTMGCLSAINTTTKRTILIPQLTYTYATTAGNATGAKTVVL
NGHKLEKKVDSGSDGVSTVEEQNDSDSLMKKRRLENGFYPCDLCSKVFQKGSSLLRHKYE
HTGKRPHECNICEKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSY
CKKDGPDSGSGPRSVQSELGSPGTALQSDSRTTTPPSQLDSDERESEEEEDDDDEAICMD
DIRVVQVDDGECEIYEGNFDDTDDEEEEEEGEEIVEGEEIVEGDMTEEEEAEGEKTGKEL
ACDVMEIEVGDHHMDDEEMEETTEEEKEEAASEVLEESADCEANTDKSVREGSESAEPAD
EVVTDAK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggctaacccgaagaggagcagcgtg
acagaattcaacgatggcggattggaggccagttcagactctgatgacgaggacaagctg
cacatcgtggaggaggaaggcctgctggagaccgaggccccccccgctgaaggggccaaa
acgcatggcggccatgactacgccacaaaagtattaccccacaacggctccctgaacgga
gtgaaggaggagtatgtgtccgaagaggaggaggaggaggacgaggaggaggaggaggag
gacgctgagaaggactctctagtggatgatatcctccagcagggagacacccccgtcatc
tttcctgaagcccccgaggatgagcagagcccggcagagacaggaggcgctgatgaaaac
ggcaccccagactccttctcccagttgcacacttgcccctactgctcacggggctacaag
cgcaacgcctcgctgaaggagcacatcaagtatcgccacgagaccagcgaggacaactac
agctgctcgcactgcagctacaccttcacctaccgctcacagctggagaggcacatgatc
caccaccggggccccaaggatcagcgccacgtttcccagtcgacaggtggatcaggagga
acaggtggaacccgcaagttcaagtgtaccgaatgttccaaggccttcaagtacaagcac
cacctgaaggagcacctgcgcattcacagcggtgagaaaccttatgaatgctccaactgc
aagaagcgattctcccactcaggctcctacagctcccacatcagcagtaagaagtgtgta
ggtgcaccaccccccaatggcgtcgctcggacctcgatcaaatcccccccacccaccacc
cagacaacacccgtcgtaattgctccagcgcgcaacattcttaaagagaagactgaaagc
aaacccctccaggagcagctgcccatcacccagatcaaatctgaacctgtggagtacgag
tgcaagcctgtgacggcggcaacggcaacttcagccgctgccaacggggggacggagcag
ccggctccaatcactaccctgcccccgggggtgtctatggtcgtacccacagtcggcctc
atgtcgcccatcagcatcaatctgaacgacttgcagaatgtgctcaaagtggcgatggac
gggaacgtgctcaggcaggtgctggggacagctaacgggctggtgacgcaggggaagcat
ggcattgtactccagcagccccagcatcagatcatcagtctgccggcctttgtggatcat
gacggcaccacgaagatcatcatcaactacagcatcagccctgcagccgccaccactgcc
actacccagcctgcatcgctttttgccaaaaccaatcctgctctccttcccactatcatc
actgctgcagcccccacccccaccaggacagataggccttcaaccccagaggtgaccgac
ctctccattgtgaagagagagccggaatcagtggccatcacagacatggagacagaggca
gtcaaacagacagaaattacatcagcgatccgatcaaatcaaaggccaaaagtcagcagc
atcagtacatgtttactctgcgatgactgtcccgacaacctggaggcgttacacctcctc
cagcaccgtaaagcagccaatggggaggctgttgactcggctgctttggacccctcgttc
gctgctctgctgagcgaggcgggggtcacgcttgaggagccgcctgtggacgatctcctc
acactcctcaagacgtacttcgcctccgatgccaaccccagcgacaaggagctgaccaag
atctcagagtctgtccgtattcccgtggatgtggtcagaaagtggtttgctaagatgaac
tttgggaaaaatgcgggcaaatatggaaataaaaccacagccgtttcgacaaagactcaa
accatgaattcgatctcagaggatgccttgaatcagaatggagaggcagagaacgacagc
tccaaagaaacatccaaccaagcctcatcacaatctggcaactcttctccatcagactct
tcaccactaagcctcaacaccggggacctcgtcatcgttaagagcgagccagaagaccca
gatgccccggactcccaggccgagccgctcgacctctccctccctaaacatatcgccgca
gcattagaaacgagcgggactcctgtcaagctgcaggaacatcctctgaacctgacctgc
ctgaggaaggagcagctcgaggggcggaccatctacatcaccacgcctcagagcggagga
tctgtcaacgtcatcactgccgcacagctgcccacattagtagccatcgccagtcagggc
acgatgggctgtctcagcgccatcaacaccaccacaaaacgcaccatcctcatcccacaa
ctcacctacacctacgccactacggccggcaacgccactggagccaagactgtcgtgctc
aacggccataagctggaaaagaaagtggacagcgggtcggacggcgtctccacagtggag
gagcagaatgactccgattcactgatgaagaagcgacggctggaaaacggcttctaccca
tgcgacctttgctccaaagtcttccagaagggcagctccctgctcaggcacaaatatgaa
cacacaggaaaacggccccatgagtgcaacatctgcgagaaggccttcaaacacaaacat
cacctgatcgaacactcgaggctgcactccggggagaaaccctatcagtgcgacaagtgc
gggaagcgcttctctcactccggatcgtactcccagcacatgaaccaccgctactcctac
tgcaagaaggacggtccagactccggctcggggccacgcagcgttcagtcggagctcggc
agccccggcaccgctctgcaatcggacagccggaccacgaccccgccctcccaactggac
tcagacgagagggagagcgaggaagaggaggacgacgacgatgaggccatctgtatggac
gacatccgggtcgtgcaggtggatgacggcgagtgcgagatctacgagggtaactttgac
gataccgacgatgaggaggaggaggaagagggagaggagattgtggagggagaggagatt
gtggagggagacatgacagaagaggaagaggcggaaggagagaagacgggcaaggagctt
gcgtgtgatgtgatggagatcgaggtcggggaccatcacatggacgacgaagagatggag
gaaacaaccgaagaagaaaaggaggaagcagcaagtgaggttttagaggaaagtgccgac
tgtgaagcaaatacggacaaaagcgtcagggaggggtcagagagcgccgaacccgcagac
gaagtggtgacagacgccaaataa
DBGET
integrated database retrieval system
