Trematomus bernacchii (emerald rockcod): 117500249
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Entry
117500249 CDS
T09643
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117500249 (capns1a)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C2: calpain family
117500249 (capns1a)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
117500249
NCBI-ProteinID:
XP_034008947
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MNFAKKFLSGVIDVVSDIDPAQFIPSEPPPPRRPAVYAEQHENDEEKQFRRVFQQLAGED
MEVSPCELMNIMNRIISKHGDLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKHLWNNVK
KWQGVYKSYDADGSGVIGADELPSAFTAAGFPLNDYLFNMIIRRYSDESGNMDFDNYIGC
LVRLDAMCRAFKTLDKDNSGTIKVNVQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgccaaaaagtttctcagtggcgtcattgatgttgtcagcgacatcgaccca
gcccagttcatcccctctgaacctcctcccccccgcaggcctgctgtgtatgcagagcag
cacgagaacgatgaggagaagcagttccgccgagtcttccagcagcttgctggagaagac
atggaagtaagcccatgtgagctgatgaacatcatgaacagaatcatttcaaaacatgga
gacctgaagacggatggtttcagcattgagtcctgtagaagcatggtggccgtcatggat
agtgacagcactggaaaactcggctttcatgaattcaaacacctctggaacaatgtcaag
aaatggcagggcgtgtacaagtcctatgacgcagatggctccggtgtcatcggtgcagat
gagttgcccagcgctttcacagctgcaggcttccccctcaacgactacctgttcaacatg
atcattcgcagatacagcgatgaaagtgggaacatggattttgacaactacattggctgc
cttgtgaggctggatgccatgtgccgtgccttcaaaaccctggataaagataacagtggg
acaatcaaagtcaatgttcaagagtggcttcagttgaccatgtactcttga
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