Trematomus bernacchii (emerald rockcod): 117500259
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Entry
117500259 CDS
T09643
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117500259 (nova1)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117500259 (nova1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
117500259
NCBI-ProteinID:
XP_034008957
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MMMMAGGVGAAVDHNGIYSNPNLHSLQQTEADNPDSRKRPLETPLEEAGCTKRTNTGEEG
EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA
LNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA
TVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLN
ISYSNVSGPVANSNPTGSPYANTAEVMPNAAAAAATASSLLGQAGLTGMGAFPATMSTFS
GNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAANLLASYAS
DVSGGVGHPGVGLGGFSLGSLAAATGASNGYLNASSPLMASSLLAAEKLGDGAKDVVEIA
VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYL
ISQRITYEQGVRATNPQKVG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggctggtggcgtcggagcagctgtggaccataacgggatttactccaac
ccaaacctccacagcctgcagcagaccgaggctgataacccggactcccgcaagcgaccg
ctggagactccgctggaggaggccggctgcaccaagcgcaccaacactggagaggagggc
gagtacttcctgaaggtgctgatccccagctatgcagccggctctataattggcaagggt
ggccagaccatcgtacaactgcagaaagagacgggtgccactatcaagctgtccaaatcc
aaagacttctacccaggcacaacagaacgtgtctgtctgatacagggtacagtcgaagcc
ctcaatggcgtccataacttcattgcggagaaagtccgcgagatgccccagagcgctcaa
aaacctgaaccagtcagcatactgcagccacagaccaccgtcaaccccgaccgcgtcaaa
caggcaaaattgattgtgcccaatagcacagctgggctgatcattggcaagggtggagcc
acagtgaaagccgtgatggagcagtcaggggcttgggtgcagctctcccagaagccagag
ggcatcaacctgcaggagcgggtggtaaccatcagtggggaacctgaacagaaccgcaag
gcagtagagatcatagtacagaagatccaggaggaccctcaaagcagcagctgcctcaac
atcagctattccaatgtctcgggccccgtggccaactccaaccccaccggctccccctac
gccaacacagccgaggtgatgcccaatgcagccgcagccgctgctaccgcctccagcctt
ctgggccaggccggcctgacaggaatgggtgccttccccgccaccatgtccaccttctct
ggcaacgatctgctcgccatcacctcagccctcaacacgctggccagctacggctacaac
accaacaccctcggtctgggcctcaaccctgcagctgcctctggggtcctcgctgcagtc
gcagctagcgccaacccggctgctgctgctgcagctaacctgctagcctcctacgctagt
gatgtgtccggtggtgtgggccacccgggtgtgggcctcgggggattctccctgggttct
ctagcagctgctacaggggcttccaatggttacctaaatgcttcatccccactgatggcc
tcctccctattggcagcagagaagctgggggatggggccaaggacgtggttgagattgct
gtgcccgagaatctggttggtgccattttggggaaaggagggaaaacgctggtagaatac
caggagctaacaggagcccgcatccagatctccaaaaagggagagttcattcctggtact
cggaaccgtaaagttaccataacagggtcgccagccgctacgcaagcagcgcagtatctg
atcagccagcggatcacttacgagcaaggcgtgcgcgctaccaacccacaaaaggtgggc
taa
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