Trematomus bernacchii (emerald rockcod): 117500310
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Entry
117500310 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117500310
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117500310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
117500310
NCBI-ProteinID:
XP_034009025
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MRVAELALRSFIQFQNASQAHASMGNFTSTPVDFTADKLDIHDAFLKEFEPSLLENCQLR
QCNTAKKEVFSSIYNYRRVVRLKLDFSSTKPKRQAISTSLLEHLSPVALLNELRPGLRYM
CLTERVHGRPMRSFVMVVRVEGGVFEGCGHSKRMAKAQAAAAALQSVYNITLGPERKVMG
LNGSRAKLQLPQVFAESVFHLVREKYSELTDVCSSSYAKHKVLAGVVMSRGFDLRTAQVV
SLATGTKCLDLDNDSDHRETLSDCHAEVMSRRALVRFLYAQLELLLCKPADCEEQSIFVP
NEVGGGFRLQDGVFFHMFVSSSPCGDARLNCPYETTAAYPSRRFHCHLRVKVDGGEGTLP
ITARRANQNNMAAFKSRVTMSCTDKMAKWSVVGLQGALLSHLVEPVYLHSVTVGTLSHTG
HLSRAFAHRLAPVKHLPFPYRRQQLMLGCLNSSDVRPSGKAPNVSVNWSRGDGGLEEISS
STGRRKDSGTPSRLCRRNMFERWQRIQQQLNGAEATPWTYSGSKMAAGRYQRAMHQFTSA
LQGGGLGTWLRETPELGHFNVSV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagggttgcagaacttgctcttcggtctttcatccagtttcaaaacgcctcgcaggct
cacgcctccatggggaactttaccagcactcctgtggattttacagccgataaactggac
atccatgacgcattcctaaaagagtttgagccatctttgctggaaaactgtcaactccgg
cagtgcaacacagcaaaaaaggaggttttctccagcatatataactacagacgagttgtc
cgccttaaactggacttctcctcaactaaacccaaaagacaagccattagcacctcactt
ttagagcacctcagcccagtggcgctgctcaacgagctgcgaccaggactcagatatatg
tgcctgacggagagagttcatggcaggccgatgaggagttttgttatggtggtcagggtg
gaggggggggtgtttgaagggtgtggtcacagtaaacggatggcaaaagcccaggcagca
gcagccgccctgcagtccgtttacaacatcactctgggaccggagaggaaagtgatgggt
cttaacggcagcagagctaaacttcagctacctcaggtctttgcagagtccgtcttccac
ctggtgagagagaaatactccgagctgacggacgtttgttcctcttcgtacgccaaacac
aaagtgctggcaggagtcgtgatgagcagaggatttgacctcaggacagcgcaggttgtg
tctctggccacagggactaagtgtctggatttggacaatgacagtgaccacagagaaacc
ctcagtgactgccacgcagaagtcatgagccgcagggcgctggttcgattcctgtacgct
cagctggagctgctgctctgtaaaccagcagactgtgaggaacaatccattttcgtacca
aatgaagttggcggtggcttccggctgcaggacggcgttttcttccacatgttcgtcagc
tcgtcgccgtgcggagacgctcgactcaactgcccctacgagaccacggctgcatatccc
agcaggaggtttcactgtcacctcagggtgaaagtggacggtggagaagggacgctgcca
atcacagcaagaagagccaatcagaacaatatggcagcatttaaatcacgcgtcacaatg
tcctgcacagacaagatggcaaagtggagtgttgttggcctgcagggggcgctcctctct
cacctggtggagccagtttacctgcacagcgtcaccgtgggaacgctcagccacacgggt
cacctgagccgagcctttgcacaccgtctcgcacccgtcaagcacctacccttcccttac
cgacgacaacagctgatgctcggctgtctgaacagcagtgatgttcggccgtcaggaaag
gcaccgaacgtcagcgttaattggagtcgtggtgatggaggcctggaggagatcagcagc
tctacaggacggaggaaagactcagggacgccgtctcggctctgcaggagaaacatgttc
gaacgctggcagaggattcagcaacagttaaacggtgcagaggcgactccatggacatat
tctggttccaagatggcggccggacgttaccaaagggcgatgcatcagttcaccagcgca
ctgcaggggggagggctgggaacttggctcagagaaactccagaactgggtcacttcaat
gttagtgtgtga
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