KEGG   Trematomus bernacchii (emerald rockcod): 117500327
Entry
117500327         CDS       T09643                                 
Symbol
pak1ip1
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like
  KO
K14830  protein MAK11
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tben03009]
    117500327 (pak1ip1)
Ribosome biogenesis [BR:tben03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    117500327 (pak1ip1)
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_SCAP Beta-prop_EML PEP5_VPS11_N WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Ge1_WD40 Beta-prop_Vps41 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd RMC1_N eIF2A Nucleoporin_N Beta-prop_WDR19_2nd Beta-prop_IP5PC_F Beta-prop_HPS5 WD40_like DUF7161 B-prop_COPA_B_2nd DUF5711 WD40_RFWD3
Other DBs
NCBI-GeneID: 117500327
NCBI-ProteinID: XP_034009052
LinkDB
Position
Unknown
AA seq 361 aa
MAAVLGLIAGSYEQVTFGYRVKTDEPEWTAKAEFTHHAHTASISAAAASERFVVTGSKDE
TIQLYDMKKKIEHGALLHHDGTISCLEFYGTSHLLSGGEDGLICVWGTKKWDCLKSIKAH
QGHVTSLSVHPSGKIALSVGTDKTLRTWNLTNGRSAFIKNIKRNAHIVRWSPDGDKYVVV
VNDEVDIYDLETASVTATMKNPKRISSVKFLNNSILAVAGDDEKVRFCDLGKEKWVCEFK
AHEKRVKAVESFVMEDHCILVTASNDGFIKMWKLYLKEELESPTLLMEVNTTARLTCLAV
WKPSSMQPPAEEPAAPTTTPQELIQELSKTKRVRIAAEEVILEDESKPKKKKKGGGKKPT
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcagctgtactggggctgatagctgggagctacgagcaggtcacctttgggtacaga
gtgaaaactgatgaaccagagtggacagcgaaggcagagttcactcatcacgcccacaca
gcatctatatcagccgcagcagccagcgagaggtttgtggtcacaggaagcaaagatgag
accatccagctgtacgacatgaagaagaagattgaacacggagctctgctgcatcacgat
ggcaccatctcttgcctggagttttacgggacgtctcatttactgagcggaggagaggac
ggactcatctgtgtttggggcacgaagaagtgggattgtctgaaatccatcaaagctcac
caaggtcatgtcacgtcgctgtccgtccatccgtctggaaaaattgcactttcagtcggg
acagataaaactctcagaacatggaatctaacaaacggaagatcggccttcatcaaaaac
ataaaacggaacgcacacatagtccgatggtctcctgatggggataaatatgtggtcgtg
gtgaacgatgaagtggacatctacgacctggagaccgcctctgtgacggcaaccatgaaa
aaccccaagaggatttcatctgtgaagttcttaaataactccattcttgcggttgcagga
gacgatgaaaaagtgaggttttgtgacctgggaaaagagaaatgggtgtgtgagtttaag
gctcatgaaaagagagtgaaggcggtcgaaagtttcgtgatggaggatcactgcatactg
gtgacggcttcaaatgacggattcatcaaaatgtggaaactttatctaaaagaggagctg
gagtctcccactctgctcatggaagtgaacacaacggcccgcctgacgtgcctcgctgtg
tggaaaccttcgtctatgcagccgcccgctgaggaaccagccgctccgaccacgacacct
caagaactgattcaggagctttcaaagacgaagagagtccgaattgcagcagaagaagtt
attctagaagacgagagcaaacccaagaagaagaaaaagggcggtggaaaaaaaccaaca
gaataa

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