Trematomus bernacchii (emerald rockcod): 117500367
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Entry
117500367 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117500367
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
117500367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
PMP1_2
Motif
Other DBs
NCBI-GeneID:
117500367
NCBI-ProteinID:
XP_034009120
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
PSVGFWEISLGAVEERLAVSLSSSFSAASSRLIMDFGTKRVAGIIAQVALLLCSSSGTNG
ADVCDSSLVSNLPPSSFRSSSQLSSSHAPGFAKLNRRDGAGGWSPLSSDSYQWLEVDLGE
RTTISAVATQGRYGSSDWLTSYLLMFSDTGHNWKQYRQEDSIGSFPGNSNADSVVQYKLQ
QPAVARFLRLLPLAWNPSGRIGLRLETYGCPYTSDVVSLDGSSSLVFRLTPDPRQTSREV
VSLKFKTLRNSGTLLHAEGERGRGLSLELERGRLQLLLRQGRTTSSEPRRLSSLGSLLDD
QHWHHLAVERRSAHLNLTVDKHTESIQIPAEFSHWHIQQLIVGAIQYPVSKRNFHGCLEN
LMYNDLKLIELAKHKDHQVTVMGNVTFSCAESVSVAVTFPGPQSFLQLPGATPSSSGGVS
VGFQFRTWNKAGLLLTFDLLQGGGVAWLYLSEARVRLQVHKAGRALLELSAGSALNDGQW
HSVDLNSRRGRLSIIVDKEEGGSAHATPSFPVTVESHLFFGGCPAEEDRQECKNPFNIFQ
GCMRLLSVENQPVDLMKVQQRLLGNYSHLQIDMCGIIDRCSPSRCEHGGRCSQSWTVFHC
NCSDSGYSGATCHSREYGQSCEAYKHNGNTSGHFYIDVDGSGPIKPQLVYCNMTEENTWM
VIQHNNSELTRVRPSPEVNQHSVHFDYSTEEEQLLAVISQSEYCEQDLSYHCRKSRLLNT
PEGSPFSWWLGGPAPGRVQSYWGGAQPGSQQCVCGLQGDCVDPQHYCNCDADRTEWTEDS
GLLTHKESLPVRSLLLGDVRRPGSEAVYRVGPLSCHGDKNFWNAAFFDKETSYLHFPTFH
GELSADISFLFKTTASSGVFLENLGIRDFIRIELSSSTRVVFSFDVGNGPLEVHVESMVP
LNDNRWHRVRAERNVKEASLRLDGLPVATQEAPADGHLHLQLNSQLFIGGTASRQKGFRG
CIRSLQLNGVPLDLEERAEITPGVQPGCPGHCSSYGSLCQNQGRCVERASGFHCDCGLSA
HTGAFCHTELSASFQSGTSLRYTFKEPYELSRNSSALPSSIYSDLTLRGENVSLSFRTNQ
SPALLLYVSSYYTQYLALLINKHDNLEVRYKLDSSRDAEVLKSKVKSLADGELHTVTIRR
LTDSVSLQIDQNPREDFNLTSDGEFNGIKTLVLGRVHDSEDLDPDLSRLASLGFSGCLSV
VRFNSISPLKAALLHPDSSPVTISGPLLQSSCGSSAAANPYAAENTHHLSDHSGVVASGQ
PLVNAIRTDSALIGGVIAVVIFVIVTALAITARFLYRRKETYRNQEVKGVKQEDSQDFHF
NNQTDPQNVSSENPKEYFI
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
ccttcagtcgggttttgggagatctctcttggagctgtagaggagaggttggccgtctct
ctctccagcagtttttctgcagcctccagtcgcctcatcatggattttgggactaaaaga
gtcgctgggattatcgctcaggtcgccctgctcctctgcagctcgtccgggacaaacgga
gcagacgtgtgtgacagctcattggtttccaatctgcctccatcgtccttcagaagctct
tctcagctgtccagcagccacgcgccgggcttcgccaaactcaacaggagagacggagcg
ggagggtggtctcctctctcctcagacagctatcagtggctggaggtcgacctcggagag
cgcaccacgatcagcgctgtggcaacgcagggacgctacggcagctctgattggctgacg
tcgtatctgctgatgttcagcgacacgggacacaactggaagcagtacagacaggaggac
agcatcgggtctttcccaggtaacagtaatgcagacagtgtggttcagtacaaactgcag
cagccggccgtcgctcgcttcctccgcctcctccctctggcctggaaccccagcgggagg
atcggactccggctggagacctacgggtgtccttacacctctgatgtggtgagtttggac
ggcagcagcagtctggtgttcaggttgacccccgacccgaggcagacgtccagagaggtc
gtctctctgaagtttaaaaccctgaggaattctgggacgctgctgcatgcagagggagag
agagggagaggactcagtctggagttagagagaggaaggctgcagctgctgctcagacaa
ggcaggactacttcctctgagccccggcgtctctcctccctcggcagcctgctggatgat
cagcattggcatcatttagcggtggagcggcgcagcgctcacctcaacctcactgtggac
aaacacacggagagtattcagatccctgcagagttcagccactggcacatccagcagctg
attgtcggggcaatccagtaccccgtctcaaagaggaactttcatggctgccttgaaaac
ctgatgtacaacgacctcaagctcatagagttagccaaacacaaagaccaccaagttact
gtcatgggcaatgtcaccttttcttgtgctgagtcggtatccgtcgccgtgaccttcccc
ggaccccagagcttcctccagttgccgggggccacgccgtcgtcgtcagggggcgtgtcc
gtcgggttccagttcaggacgtggaacaaggcggggcttctgctgacctttgacctgctt
cagggagggggcgtggcctggctctacctgagtgaggccagagtccggctgcaggtccat
aaagctggcagggcgctgctggagctcagtgcaggttctgctctgaatgacggtcagtgg
cattcggtggatctgaactccaggcgaggtcgtctgagcatcatcgtggataaagaggaa
ggaggcagcgctcacgccactccttcatttcctgtcactgtagaaagtcacctcttcttt
ggtggttgtccggctgaagaggaccgtcaggaatgcaaaaatcccttcaacatctttcag
ggctgcatgcgtctcctcagtgtggagaaccagcccgtggacctgatgaaggtgcagcaa
aggctgctgggaaactacagccacctgcagatcgacatgtgtggcatcattgacaggtgt
tctcccagtcggtgtgaacatggcggccgctgcagtcagtcctggaccgtcttccactgt
aactgctctgacagcggctacagcggagccacctgccacagccgtgagtacggacagtcc
tgcgaggcgtacaaacacaacggcaacacgtcgggacatttttatatcgacgtggacggc
agcggaccaatcaaaccgcagctggtgtactgcaacatgacagaggagaacacatggatg
gtgatccagcacaacaacagcgagctgaccagagtgcggccgtctccagaggtaaaccag
cactcagttcactttgactactccactgaagaagagcagctattggccgtcatcagccaa
tcagagtactgtgaacaggatctgtcctaccactgcaggaagtcccgcctcctcaacact
ccagagggctctccgttcagctggtggctcgggggtcccgctcccggtcgtgtccagtct
tattgggggggggctcagccgggcagccagcagtgtgtgtgcgggctgcagggagactgt
gtggaccctcagcactactgcaactgtgacgctgaccgcaccgagtggactgaggactct
gggctgctcacccataaggagagcctccctgtccggtctctgttgctaggtgacgtcagg
aggccggggtcagaggccgtctacagggtgggaccgctcagttgtcatggagacaagaac
ttctggaacgctgcgtttttcgacaaggagacgtcgtacctccacttcccgaccttccac
ggagagctgagcgcggatatctccttcctgtttaaaaccaccgcctcctccggtgtgttc
ctggagaacctgggcatcagagacttcatccggatcgaactgagctcctccactcgggtg
gttttctccttcgacgtcggtaacgggcctctggaggttcatgtggagtcaatggtgccg
ctgaacgacaaccggtggcatcgagtcagagcggagaggaacgtcaaagaggcgtcgctg
cggctggacggacttcctgtcgccacacaggaagctccggctgacggacacctccacctg
cagctcaacagccagctgttcataggaggcacagcgtccaggcagaagggcttccggggt
tgtatccgctccctgcagctgaacggcgtccccctggacctggaggagcgggcggagatc
acccccggggtccagcccggctgcccgggtcactgcagcagctacggctcgctctgccag
aaccagggccgctgtgtggagagagccagcggcttccactgcgactgcggcctgtcggcg
cacactggagccttctgccatacagagttgtcggccagcttccagtcgggcacgtcgctg
cgctacaccttcaaggagccgtacgagttgagcaggaacagcagtgccctgccgtcctcc
atctactcggacctgacgctgagaggagagaacgtctcgctgagcttcaggaccaatcag
agcccggctctgctgctctacgtcagctcctactacacccagtacctggccctgctcatc
aacaagcacgataatctggaggtgaggtacaagctggacagcagcagagacgctgaggtg
ttgaagagcaaagtgaagagtctggcagacggagaactccacaccgtcaccatcaggaga
ctgactgactccgtgtctctgcagatcgaccagaaccccagagaagacttcaacctgaca
tcagacggagaattcaacggcatcaagacgctggtgctgggcagagtgcacgactcggag
gatctggatccagatctgtccaggttggcgtctctgggtttctccggctgtctctcggtg
gtccgctttaactccatcagccctctgaaagctgctctgctgcacccggacagcagcccc
gtcaccatctccggacctttactgcagtccagctgcggctcctcggctgcagccaatccc
tacgcagcagagaacacacaccacctgtcagatcattctggtgtagtggcttcaggtcaa
cctttagtcaatgccatcaggactgactcggctctaattggaggggtcatagcggtggtg
atctttgtgattgtgaccgccctggcgataacggccagattcctctaccggagaaaagag
acgtaccggaaccaggaagtgaagggagtcaaacaggaagacagccaggatttccatttc
aacaaccagacggacccccagaacgtctcctctgaaaacccaaaggagtatttcatctga
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