Trueperella bernardiae: QPC17_00005
Help
Entry
QPC17_00005 CDS
T09150
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tber
Trueperella bernardiae
Pathway
tber03030
DNA replication
tber03430
Mismatch repair
tber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QPC17_00005
03430 Mismatch repair
QPC17_00005
03440 Homologous recombination
QPC17_00005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tber03032
]
QPC17_00005
03400 DNA repair and recombination proteins [BR:
tber03400
]
QPC17_00005
Enzymes [BR:
tber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QPC17_00005
DNA replication proteins [BR:
tber03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QPC17_00005
DNA repair and recombination proteins [BR:
tber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QPC17_00005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_14
AAA_16
Mg_chelatase
Rad17
AAA_28
DEAD
AAA_18
AAA_19
nSTAND3
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WIM07968
LinkDB
All DBs
Position
join(2102980..2103060,1..3024)
Genome browser
AA seq
1034 aa
AA seq
DB search
MSIALYRRYRPESFQEVIGQDHVTRPLMAALEAGRTTHAYLFSGPRGCGKTTSARILARC
LNCVEYPTAKPCGKCESCRELARDGSGSLDVVELDAASHGGVDDARELREQAGFAPVRDR
FKIFIIDEAHMVTSQGFNALLKLVEEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVP
PLELEQYLALVCAREGVSAGKDLLSLVVRAGTGSVRDTLSVLDQIIGGSEGTRLDYDRAV
ALLGYTSAALLDDAVDAISTRDGSALFGVVDKVVKSGHDPRRFVEDMLQRLRDLVIIALA
GDEAKDVFVSVPEDQYGRMVEQAAALGAERASQCADLTNAALSDMAGATAPRLQLELLCA
RLVIARVGVPAQVVESGPEAPSPEVASSLAKFRAKPAGSGRVTGGAQLAGRGPGQPEGHQ
VGQQAGQAGNAGPGGQISGAQGVAGSVEQQRRLDQMDPRRRPMPVMTSAGFDGDGKAPAQ
SVLERQSSQEGESAGRASEGRAPQQGHADMPAPERQAGEQQEVRQASAQPAPERAVSEQS
APARQSAPEQQATHPPQPTQAQGAPEQAPAQPAEPAGQSGGDPLAQISAQWPAIMADQSL
SRIAHAQLGAANGPVRVEGGVLYVGFEQPGVAGAFTARGAREVERIIANMFGLALRVEGL
AGGEPSAPKADAAQAAAPQPPAVDFERAEPSRPAVSRDPEHAPAGPPQDAEGLRGAQSGD
LRASAAESEPESADVREPVAGSGAHQQARPVTKRAGEPAETGEPRRPSKSHSAAEPDWAP
PYGDEPDFDESNVDDSDLGEPDPAHDPSFTAEPATDGMPGTPAFGATGGPAFGATPATES
GAAPGPGLDQAPGHDHGESPERSAADILGSAAESFPMPPPAELPESLASGHANTTGHDPT
GFAQFHVPPVEDPYTHTTLGKWAQPSSLDRRPDGPDPDDLPDEGADASTQTYPAQAAPTP
TRAGLTGTDFQALAAAHAHPTRADYPDEPAVVDDSHPEWEGASADDPDISQSTMVGLQVL
LERFEAKVIEEREE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatagccctgtatcgccgctaccggcccgagtcctttcaagaagtgatcggtcaa
gatcacgtcacccggccactgatggccgctcttgaggcgggccgcaccacgcatgcctat
ttgttttccgggccgcgcggttgtggcaagacgacgtcggcgaggatcctcgcccgctgc
ctcaactgtgtggagtaccccaccgcgaagccgtgtgggaagtgtgagtcgtgccgggag
ttggcgcgcgatgggtcggggtcgctcgacgtcgtggagctggacgcggcgtcgcacggc
ggtgtagacgacgcgcgggagctgcgcgagcaggccgggttcgcgccggtgcgggatcgc
ttcaagatcttcattatcgacgaggcacacatggtcaccagccagggcttcaacgcgttg
ttgaagctggtggaggagccgccgccgcacgtgaagttcatttttgcgaccaccgagccg
gaaaaggtgatcggcacgatccgctcgcgcacgcaccactacccgttccggctggtcccg
ccgctggagctcgaacagtacctggcgctggtttgcgcgcgtgagggcgtgagcgcgggg
aaggacctgctgtcgttggtggtccgcgcgggaacgggctcggtgcgtgacacgctctcg
gtcctcgaccagattatcggcggctccgagggcacgcgccttgactacgaccgcgccgtc
gccctcctcggttacacctcggcggcgttgctcgacgacgccgttgacgccatctccacg
cgggatggttcggcgctgtttggggttgtggacaaggtggttaagtctggtcacgacccg
cggcgcttcgttgaggacatgctccagcggctgcgggatctggtgatcatcgcgctcgcg
ggagatgaggcgaaggacgtgttcgtctcggtgccggaggatcagtatgggcggatggtt
gagcaggcggcggcgcttggggcggagcgcgcctcgcagtgtgcggacctgacgaacgct
gcgctgagcgatatggccggtgccaccgcgccgcgactccagctggagttgctgtgcgct
cggctggtgattgcgcgggtgggcgtgccggcgcaggtggtcgagagcgggcccgaggcg
cccagccccgaggtggccagcagcctggcgaagttccgggcgaagccggccgggtctggg
cgcgtgaccggtggcgcacagctggccgggcgcgggccggggcagccggagggacatcag
gtcggtcagcaggcgggccaggccggaaatgcgggcccaggcgggcagatctcgggtgcg
cagggtgtggctggatctgtcgagcagcagcggcgcttggaccagatggatccacgcaga
cggcccatgcctgtgatgacgagtgcagggttcgacggcgatggcaaggcgcccgcgcaa
tctgttctggaaagacagagctcgcaggagggggagtcggccgggcgcgcgtccgaaggc
cgcgcgccccagcaggggcatgccgatatgccagcccccgagcggcaggccggggaacag
caagaagtgcggcaggcgtcggcgcaaccggcacccgaacgcgctgtttccgagcagtcg
gctccagcacggcaatcggctccggaacaacaggcgactcaccctccgcagccaactcag
gcccagggtgcgcccgagcaggcgccggcacagccggccgaacccgccgggcagtccggc
ggcgacccgcttgcgcagatcagcgcgcagtggcccgcgatcatggccgaccagagcctg
tcccgcatcgcccacgcccaactcggtgcggcaaatggcccggtcagggtcgagggcggg
gtactctacgtcggcttcgaacagcccggcgttgccggggcgttcacggcgcgtggcgct
cgcgaggtcgagcggatcatagcgaacatgttcggactcgccctccgagtcgaaggattg
gcgggaggcgaaccgtcggccccaaaagctgacgccgcgcaggccgcggcaccccaaccg
ccggccgtcgactttgagcgagccgaaccatcacgcccagcggtgagccgagatcctgag
catgcaccagccggcccgcctcaagatgccgagggtttgcggggtgcgcagtcaggtgac
ttgcgcgcatctgcagcggagtcggagccggagtcagccgatgtgcgtgaaccggtggcc
ggctcaggcgcgcaccagcaggcaaggccggtaacgaagcgggcgggcgagcccgcagaa
actggcgaacctcgcaggccctccaaatctcactcggccgcggagcccgactgggccccg
ccctacggcgacgagcccgacttcgacgaatctaacgtcgacgattctgatctcggcgaa
ccggaccccgcccacgacccgagctttaccgcagagccggccaccgacggcatgcccggc
acccctgcctttggcgcgaccggcggccctgctttcggggcgacacctgctacagaatcc
ggcgcggcgcccggccccggtcttgaccaagctcccggccacgatcacggcgagtcgccc
gagcgctccgccgctgacatcctcggctccgcagccgagagcttcccgatgccgcctccg
gccgagctaccagagagcttggcctccggccacgccaacaccacgggccacgacccgacc
gggttcgcacagttccacgtgccgcccgtcgaagatccctatacgcatacgacattgggc
aagtgggcgcaaccgtcgtcgttggaccgccgcccggacggcccggacccggacgacctc
ccggacgagggcgccgacgcctccacccagacgtacccggcccaggccgcccccaccccc
acccgcgccggccttaccggcaccgacttccaggccctcgccgccgcacacgcccacccc
actcgtgccgactacccggacgagcccgccgtcgtcgacgattcccaccccgaatgggaa
ggtgcctccgccgacgacccggacatctcacagtcgaccatggtgggtctgcaggtcctg
ctcgagcgcttcgaggctaaagtgatcgaagaacgggaggagtag
DBGET
integrated database retrieval system
