Trueperella bernardiae: QPC17_02545
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Entry
QPC17_02545 CDS
T09150
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tber
Trueperella bernardiae
Pathway
tber00260
Glycine, serine and threonine metabolism
tber00630
Glyoxylate and dicarboxylate metabolism
tber00670
One carbon pool by folate
tber00680
Methane metabolism
tber01100
Metabolic pathways
tber01110
Biosynthesis of secondary metabolites
tber01120
Microbial metabolism in diverse environments
tber01200
Carbon metabolism
tber01230
Biosynthesis of amino acids
tber01240
Biosynthesis of cofactors
tber04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QPC17_02545 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QPC17_02545 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QPC17_02545 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QPC17_02545 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QPC17_02545 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QPC17_02545 (glyA)
Enzymes [BR:
tber01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QPC17_02545 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WIM08437
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Position
550436..551722
Genome browser
AA seq
428 aa
AA seq
DB search
MTDLFNQSLRDLDPDIAKVLDDELNRQREQLEMIASENFVPRAVLQAQGSVLTNKYAEGY
PGKRYYGGCEFVDVAESLAIERAKAVFGAEYANVQPHSGAQANAAIYHALLKPGETIMGL
ELSHGGHLTHGMKINFSGKNYNVVAYGVSPDTYLIDMDDVRAKALEHKPKLIIAGWSAYP
RHLDFQAFRDIADEVGAYLWVDMAHFAGLVAAGLHPNPVPYADVVTTTIHKTIGGPRSGM
ILSRDAETFGRKLNSAVFPGQQGGPLMHVVAAKAIALKIAATAEFKDRQRRTLEGAKILA
ERLAQPDVAEKGIAVVSGGTDVHLVLVDLRDAELNGQEGEDLLHEVGITVNRNTVPFDPR
PAAVTSGLRIGTPALATRGFGADEFREVADVIATALRDGKDADVAALRARTAKLAADFPL
YEGLDQFA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccttttcaaccagtcgctgcgcgacctcgacccggacatcgcgaaggttctt
gatgatgagctgaaccgccagcgcgaacagctcgagatgatcgcctccgaaaacttcgtg
ccccgcgccgtgctccaagcgcagggctcggtgctgaccaacaagtacgccgagggctac
cctggcaagcgctactacggtgggtgcgagttcgtggacgtggccgaatcgctcgcgatc
gagcgagccaaggccgtgttcggcgccgagtacgccaacgtccagccgcactcgggcgcc
caggcgaatgccgccatctaccacgccctgctcaagccaggggagacgatcatgggcctc
gagctctcccacggcggccacctcacccacgggatgaagatcaacttctcgggcaagaac
tacaacgtggtcgcctacggcgtctcgcccgacacgtatctcatcgacatggacgacgtg
cgggccaaggccctcgagcacaagccgaagctcatcatcgccggctggtcggcctacccg
cgccacctcgacttccaggccttccgcgacatcgccgacgaggtcggcgcctacctgtgg
gtggacatggcgcacttcgcgggccttgtggccgccggcctgcacccgaacccggtgccc
tatgccgacgtcgtcaccaccacgatccacaagaccatcggcgggccccgctccggcatg
attctctcccgtgacgcggagaccttcggccgtaagctcaactcggccgtcttccccggc
cagcagggcggcccgctcatgcatgtggtggcggccaaggcgatcgcgctgaagatcgcg
gccacggccgagttcaaagaccgtcagcgccgcacgctcgagggcgcgaagatcctggcc
gagcgcctcgcccagcccgacgtggccgagaagggtatcgcggtggtctccggtggcacc
gacgtccacctcgtgctggtggacctgcgcgacgccgagctcaacggccaggagggggag
gacctgctccacgaggtcggcatcacggtcaaccgcaacaccgtgccgttcgacccgcgc
ccggccgctgtcacctccggcctgcgcatcggcaccccggcgcttgccacccgcggcttt
ggcgcggatgagttccgcgaggtcgctgacgtcatcgccaccgccctgcgcgacggcaag
gatgcggacgtggcggccctacgcgcccgcactgccaagctcgccgccgacttcccgctg
tacgaagggctggaccagttcgcatga
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