Trueperella bernardiae: QPC17_03175
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Entry
QPC17_03175 CDS
T09150
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tber
Trueperella bernardiae
Pathway
tber03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QPC17_03175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tber03019
]
QPC17_03175
03016 Transfer RNA biogenesis [BR:
tber03016
]
QPC17_03175
Enzymes [BR:
tber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QPC17_03175
Messenger RNA biogenesis [BR:
tber03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QPC17_03175
Transfer RNA biogenesis [BR:
tber03016
]
Prokaryotic type
tRNA degradation factors
QPC17_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
KH_1
S1
PNPase
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WIM08559
LinkDB
All DBs
Position
685054..687393
Genome browser
AA seq
779 aa
AA seq
DB search
MEGPDVKFAEAVIDNGSFGTRTVRFETGLLARQAAGSALAYLDGETTILSATAVSSQPRE
QFDFFPLTVDVEERQYAAGRIPGSFFRREGRPSTDAILACRLIDRPLRPAFAKGLRNEVQ
IVATVLTVHPDDAYDVVAMNAASMSTQISGLPFSGPIGAVRLALIDGQWVAFPRYSELPD
ATFIMVVAGRIVGDDIAVMMVEAEAGDEALDNVAKGGTKPTETSVAEGLEAAKPFIRTLC
EAQLKLAEQVEKEELDLPRFLPYEDEEFEAVGQQINGRFEALWGIVDKHERDDALNELTE
TIVSELSDRFEDREQALTLAVNQHWKEEMRYRVLTEGVRMDGRAPAQIRTITAETEVLPR
VHGSALFQRGETQILGVTTLNMLKMEQQLDNLSPVTAKRYMHHYNFPPYSTGETGRVGSP
KRREIGHGMLAERALVPVLPAREDFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGVP
LKAPVAGIAMGLISGVVEGEQRYVALTDILGAEDALGDMDFKVAGTRDMVTALQLDTKLD
GIPAAVLAQALTQAHEARLAILDLIEEAAPAPDEMAETAPRIISIKIPVDKIGEVIGPKG
KMINQIQEDTGAEISIEDDGTVYIGANDGPSAEAARQTISAIADPQMPEVGERFVGTVVK
TTTFGAFISLAPGKDGLLHISQVRRLVGGKRIDAVEDVLNVGDKVEVELAEIDQRGKLSL
HAVLTDEQLAAEAEQSAKEEEDRPRRRNRREDGEKRGGERRRRRTRTREESDSEESADE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagacgtgaagttcgccgaagccgttattgacaacggctcgttcggcacc
cgtaccgttcgtttcgagaccggcctgcttgcccgccaggctgccggctcggcacttgct
tacctcgacggcgagacgaccatcctgtccgccaccgccgtctcctctcagccgagggaa
cagttcgatttcttcccgctgaccgttgatgtcgaagagcgccagtacgcggccggccgc
atccccggctcgttcttccgccgcgagggccgcccgtccaccgacgcgatcctggcctgc
cgcctcatcgaccgcccgctgcgcccggcgttcgccaagggcctgcgtaacgaggttcag
atcgtggccaccgtgctcacggttcacccggatgacgcctacgacgtcgtcgccatgaac
gccgcctcgatgtccacccagatttccggcctgccgttctcgggcccgattggtgccgtg
cgcttggccctcatcgacggccagtgggtggccttcccgcgctactccgagcttccggat
gccacgttcatcatggtggtggccggccgtattgttggcgacgacatcgccgttatgatg
gtcgaggccgaggctggcgatgaggcgctggacaacgtggccaagggcggcacgaagccc
accgagacctcggttgccgagggcctcgaggccgccaagcccttcatccgcaccctgtgc
gaggcgcagctcaagctcgccgagcaggtggagaaggaagagcttgacctgccgcgcttc
ctgccgtacgaggacgaggagttcgaggctgttggccagcagatcaacggccgcttcgag
gccctgtggggcatcgtggacaagcacgagcgcgacgacgccctcaacgagctgaccgag
accatcgtctccgagctgtccgaccgcttcgaggaccgcgagcaggccctcaccctggct
gtgaaccagcactggaaggaggagatgcgctaccgcgtcctcaccgaaggcgtgcgtatg
gacgggcgtgccccggcacagatccgcaccatcacggccgagaccgaggtgcttccgcgc
gttcacggctcggccctgttccagcgtggcgagacccagatcctgggcgtgaccaccctc
aacatgctcaagatggagcagcagctggacaacctctcgccggtcacggccaagcgctac
atgcaccactacaatttcccgccgtactcgaccggtgagacgggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcatgctcgccgagcgcgccctggtcccggtcctgccc
gcgcgcgaggacttcccctacgcgatccgccaggtttctgaggctctcggctccaacggt
tcgacgtcgatgggctcggtttgtgcctccaccctgtcgctcctcaacgcgggtgtgccg
ctcaaggctccggttgccggtatcgccatgggcctgatctccggcgtggttgagggcgag
cagcgctacgttgcgcttaccgacatcctcggcgccgaggacgcgcttggcgacatggac
ttcaaggtggctggcacgcgtgacatggtgacggccctccagcttgacaccaagctggac
ggcatcccggccgcggtcctcgcccaggcgctcacccaggctcacgaggcccgcctcgcg
atcctcgacctcatcgaggaagccgccccggccccggacgagatggcggagaccgccccg
cgcatcatttccatcaagatcccggtggacaagatcggcgaggtcatcggcccgaagggc
aagatgatcaaccagatccaggaggacacgggagcggagatctcgatcgaggacgacggc
acggtctacatcggcgcgaacgacggcccgtcggccgaggccgcccgccagaccatcagc
gcgatcgccgatccgcagatgccggaagtgggcgagcgtttcgtgggcacggtggtcaag
accaccaccttcggtgcgttcatctcgctggccccgggcaaggacggcctcctgcacatc
tcgcaggtccgccgactggtcggtggcaagcgcatcgacgccgtggaggacgtgctcaac
gttggcgacaaggtcgaggtcgagctggccgagatcgatcagcgtggcaagctctcgctc
cacgcggtcctcaccgacgagcagctggccgctgaggccgagcagagcgcgaaggaagaa
gaggatcgcccgcgtcgccgtaaccgccgcgaggatggcgagaagcgtggcggcgagcgt
cgtcgccgtcgcactcgcacccgcgaagaaagcgactcggaggagtccgctgacgagtaa
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