Trueperella bernardiae: QPC17_03865
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Entry
QPC17_03865 CDS
T09150
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tber
Trueperella bernardiae
Pathway
tber03030
DNA replication
tber03430
Mismatch repair
tber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QPC17_03865
03430 Mismatch repair
QPC17_03865
03440 Homologous recombination
QPC17_03865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tber03032
]
QPC17_03865
03400 DNA repair and recombination proteins [BR:
tber03400
]
QPC17_03865
Enzymes [BR:
tber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QPC17_03865
DNA replication proteins [BR:
tber03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QPC17_03865
DNA repair and recombination proteins [BR:
tber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QPC17_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WIM08686
LinkDB
All DBs
Position
complement(830744..831346)
Genome browser
AA seq
200 aa
AA seq
DB search
MTSFAVVDVETTGLDRRADRIVEIAVILLDRNLVEEGRWQSLVNPGRATSAVEIHGLTDA
ALAGAPRFAEISGRVLELLAGRVLVAHHAAFERAFLSRELARAGYDLGLDEGACVCTMDQ
SRIYLPPGSHSLRGVAKRLGLPPAPRHRAMHDAETCASLLRYYVEFEQRGQRYTDTATNR
DGAPVYPAQWERARCWAPIS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgacttccttcgccgttgtcgacgtcgagaccaccgggctcgaccgccgcgccgaccgc
atcgtcgaaatcgcggtcatcctccttgaccgcaacctagtcgaggaagggcggtggcag
agtctcgtcaaccccggccgcgccacctccgcggtggagatccacggcctgaccgacgcc
gcgctcgcaggcgctccgcgcttcgcggagatctccgggcgggtgctcgagctgctggcc
gggcgggtgctcgtggcccaccacgccgccttcgaacgcgccttcctcagccgcgagctt
gcgcgggccgggtacgaccttggcctcgacgagggggcgtgcgtgtgcacgatggaccag
tcacgcatatacctgcccccgggatcgcattcgctgcgcggggtggccaaacggctcgga
ctgccgcccgcaccgcgccaccgcgccatgcacgacgccgaaacctgcgccagcctccta
cgctactacgtggagttcgaacagcgcggccagcgctacactgacacggccacgaaccgc
gacggcgcccccgtctaccccgcccaatgggaacgcgcccggtgctgggcgcccatcagc
tag
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