Trueperella bernardiae: QPC17_03870
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Entry
QPC17_03870 CDS
T09150
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tber
Trueperella bernardiae
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tber03032
]
QPC17_03870
03400 DNA repair and recombination proteins [BR:
tber03400
]
QPC17_03870
Enzymes [BR:
tber01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QPC17_03870
DNA replication proteins [BR:
tber03032
]
Prokaryotic type
DNA Topoisomerases
QPC17_03870
DNA repair and recombination proteins [BR:
tber03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QPC17_03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WIM08687
LinkDB
All DBs
Position
831737..833869
Genome browser
AA seq
710 aa
AA seq
DB search
MPSVSSTEKQEYNARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSIDEATEG
YASSIRVTLFSDGSVEVEDNGRGIPVDEVPGTGASGVEVVYTKLHAGGKFDSANYGSAGG
LHGVGASVVNALSQRLDVAVKREGKVWEMSFQRGEPGVFDDAGAPAPDAPFTPFTTSSEL
RVTGKVAKKVTGTRVRYWADPEIFPKDTEFSYAHLIERVREKAFLVPGLEVVVRDERGLP
ERADAPVEEVFKYDGGVVDFVDHLATDPAVSRTMHLTGQGTFDETVQVLDKKSGHLRARE
VERVCDVDIALRWGNGYDTREETFVNIIATPKGGTHLVGFEQGLVKVVRAQIEAKSRQLK
VTARDPRIEKDDILAGLTAVVAVRFPEPQFEGQTKEVLGTAPIRAIVAKVVEEGLTREFA
STKRDAKGENQRVLEKVVAEMRARVAARTQKEISRRKNALETSSLPAKLADCRSDDIERT
ELFIVEGDSALGTAKLARDSEFQALLPIRGKILNVQKASHTDILNNQEVSSIIQVVGAGS
GRTFDLDAARYGKVIFMTDADVDGAHIRTLLLTLFFRYMRPLVEAGRVYAAVPPLHRVEV
AGRGGKKGEYIYSYSDAELHRILARLEKSGRTYKQPIQRYKGLGEMDANQLAETTMDPSH
RMLRRVSLADEEALRFAEDTFELLMGSEVAPRRDFIVEGADDISREQIDA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgtgtcaagtactgaaaagcaggaatataacgcccgccacctgtcggtcctc
gagggcctggaagccgtgcgcaaacgcccgggcatgtacatcggctccaccgattcgcgc
gggctcatgcactgcctatgggagatcattgacaattcgatcgacgaggcgaccgagggc
tatgcgtcctcgatccgcgtgacgctgttctcggacggctcggttgaggtggaggacaac
gggcgcggcatcccggtggacgaggtgccgggcacgggcgcctccggcgtcgaggtggtg
tataccaagctgcacgcgggcggcaagttcgactcggccaactacggttcggccggcggc
ctgcacggtgtgggcgcctcggtggtcaacgcgctctcccagcgcctcgacgtggccgtc
aagcgcgagggcaaggtgtgggagatgtccttccagcgcggcgagcccggcgtgttcgac
gacgccggcgccccggcccccgacgcccccttcaccccgttcaccaccagctccgagctg
cgcgtgaccgggaaggtggcgaagaaggtgacgggcacgcgggtgcggtattgggctgac
ccggagatcttcccgaaggataccgagttttcctacgcgcacttgatcgagcgcgtgcgc
gagaaggccttcctcgtgccgggcctcgaagtcgtcgtgcgcgacgagcgcggcctgccc
gagcgcgccgacgcgccggtggaggaggtcttcaagtacgacggcggcgtggtggacttc
gtcgaccatctggccaccgacccggccgtgtctcgcaccatgcacctgaccggccagggc
acgttcgacgagaccgtccaggtgctcgacaagaagtcgggccatctgcgggcgcgagag
gtggagcgcgtgtgcgacgtcgacatcgcgctgcgctggggcaacggttacgacacgcgc
gaggagaccttcgtcaacatcatcgccaccccgaagggcggcacgcacctggtgggcttc
gagcaggggctagtcaaggtggtccgcgcccagatcgaggccaagtcgcgccagctcaag
gtcacggcgcgcgatccgcgcatcgaaaaggatgacatcctggcgggcctcacggccgtc
gtcgccgtgcgcttccccgagccgcagtttgaggggcagaccaaggaggtgctgggcacg
gcacctatccgcgcgatcgtggcgaaggtggtcgaggaggggctaacgcgcgagttcgct
tccaccaagcgggatgcgaagggcgagaaccagcgcgttttggagaaggtggtggcggaa
atgcgcgcccgcgtggccgcccgcacccagaaggaaatctcgcggcggaagaacgcgttg
gagacgtcgtcgttgccggcgaagctggccgactgccgatcggacgacatcgagcgcacc
gagctgttcatcgtggagggagattcggcgctcggcaccgccaagctcgcccgcgactcc
gagttccaggccctgctgccgatccgcggcaagatcctcaacgtgcaaaaggcctcgcac
accgacatcttgaacaaccaggaggtctcttcgatcatccaggtggtaggggccggctcg
gggcgcacctttgacctggacgcggcgcgctacggcaaggtgatcttcatgaccgacgcg
gatgtggacggcgcccacatccgcaccctgctgctcacgctgttcttccgctacatgcgc
ccccttgtggaggccgggcgcgtgtatgcggcggtcccgccgctgcaccgggtggaggtg
gcaggccgcggcggaaagaagggggagtatatctacagctactccgacgccgagctgcac
cgcatcctcgcccgtctggagaagagtgggcgcacgtacaagcaaccgatccagcgctac
aagggcctgggcgagatggacgccaaccagctggcggagaccaccatggatccatctcac
cggatgctgcgtcgagtgtcgctcgccgacgaggaggcgttgcgtttcgccgaggacacc
ttcgagctgctcatgggatcggaagtggcgccgcggcgcgatttcatcgtcgagggcgcg
gacgatatttcgcgcgagcagatcgacgcgtag
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