Trueperella bernardiae: QPC17_04265
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Entry
QPC17_04265 CDS
T09150
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tber
Trueperella bernardiae
Pathway
tber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QPC17_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tber03400
]
QPC17_04265
Enzymes [BR:
tber01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPC17_04265
DNA repair and recombination proteins [BR:
tber03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QPC17_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
HVO_2753_ZBP
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-ProteinID:
WIM08761
LinkDB
All DBs
Position
921038..923128
Genome browser
AA seq
696 aa
AA seq
DB search
MTNDELFGLPDFGHQEELLSLSPVARRVGGVDRPVARVLLDMPQPHMDHLFDYEIPEKMA
AVEEGARVVVNVGQRKVDGFVVGRSEVTQVASLRPLARVVSPMRVLTPEVLELARAVAAR
QAAPVADCLRLAIPQRHARAEREFFDDPPSFGAPKVLDDAPWSAYIGGPEFATEVRAGSH
PSAAVQMRARDRVHHLLPFLLSAVREAGESVLIVVPTPTIARQLAADVERLVGETPALML
SQDEHATRYRTFLAVLTGRARIVVGTRAAAWAPLEKLGMVVVVDDHHSALRERRSPYVHA
REVLALRAKLSGASFVSFNFGPSPELAAMVQRGQVRWITPALSEHRGGVPQIMAAQDFRT
EGIDLARMPSSVFAVTREGLTRGPVLFLVPEAGYVPVTACNRCRELATCPVCGGWLAISH
PGAPLQCSRCSQVVRQFRCASCGGGQVRAARIGSQRTAQEVGRAFRGTPVHVAGVGQSAG
LDGSARIVVSTPGVVPDVEGGYAAAVVLDSGYLLRSNRLDAEVHFLRTIAHAAAHTRARS
EGGKMLVVGDVPTPLVGALHTWDMAGWAEGVLSERGPIALPPTSCWVEVRGDHAGLRDFL
GLLRAVSAQAEGSPSSGAPRSGGADLPVDALLGGGAHDVVPGIAVLGPQVAGDGLVAYLR
FPESERAEKTAAVYAAVREASARRVAGVRVRVDPEL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgacgagctgtttggcctcccagattttgggcatcaggaagagttgctctcc
ctgagccctgtggcacgccgcgtcggcggggtggatcgccccgtagcgcgcgtgctactc
gacatgccccagccgcacatggaccacctcttcgattacgagatcccggagaagatggcg
gccgtggaagaaggcgctcgcgtggtggtcaatgtgggccagcgcaaggtggacgggttc
gttgtcgggcgtagcgaggtgacacaggtggcctcgctacgcccgcttgcccgtgtggtt
tccccgatgcgggttctcaccccggaggtgctcgagctcgctcgggcggtcgccgcccgg
caggcggcgccggtggcggactgcctgcgcctggccatcccgcagcgccacgcccgtgcc
gaacgggagtttttcgacgacccgccgtcgttcggggcaccgaaggtgctcgatgacgcg
ccgtggtcggcctacatcggcgggccggagttcgccaccgaggtgcgagccggatctcac
cccagtgcggcggtgcagatgcgggcccgggatcgggtccaccaccttctgccgttcctc
ttgagcgccgtgcgggaggcgggagagtcggtgctcatcgtggtgcccacccccacgatt
gcgcgccagcttgcggcggatgtggagcggttggtgggggagacgcccgcgctcatgctg
tctcaggacgagcacgccacgcgataccgcacgttcctggcggtgctcacgggccgggcc
aggatcgtggtgggcacgcgcgcggcggcgtgggcgccgctggagaagctgggcatggtg
gtggtcgtggacgatcaccactcggcgctacgcgaaaggcgcagtccctacgtccatgcc
cgcgaggtgctggcccttcgcgccaagctcagcggtgcgtccttcgtgtccttcaacttc
ggcccgtccccggagctggccgcgatggtgcagcgagggcaggtgaggtggataaccccg
gctctgagcgaacaccggggcggggtgccgcagatcatggcggcgcaggatttccgcacc
gagggaattgacctggcccggatgccttcgtcggtcttcgcggtcacgcgcgaggggctg
acgcgtgggccggtgctcttcctcgtgccggaggcaggttacgtgccggtcacggcgtgc
aacaggtgccgggagcttgccacctgcccggtgtgcgggggatggctggcgatcagtcat
ccgggcgcgcccctgcagtgttcgcgctgctcgcaggtggtgcgccagttccggtgcgcc
tcgtgcgggggcgggcaggtgcgcgccgcgcggatcggatcgcagcgcacggcccaagaa
gtcgggcgggcgttccggggcaccccggtccacgtggcgggggttggccagtcggccggg
cttgacgggtcggcgcgcatcgtcgtctccactcccggcgtggtgccggacgtggagggc
gggtatgcggccgccgtcgtgcttgactcgggctacctgttacgctccaaccgcctggac
gcggaagtccatttcctgcgcacaatcgcccacgccgccgcccacacccgggcacgcagt
gagggcgggaagatgctcgtggtgggggacgtgcccacgcccctggtgggagcccttcac
acgtgggacatggcgggctgggccgagggcgtgctcagtgagcgcgggccgatcgctctg
ccgcccacgtcgtgctgggtggaggtgcgaggggatcacgcgggtctgcgtgacttcctc
gggctgctgcgtgccgtgtcggcgcaggcggagggctcgcctagttccggcgcgcccagg
tctggtggtgcggacctaccggtggatgcgctgcttggcggcggcgcgcacgacgtcgtg
cccgggatcgcggtgcttggcccgcaggtggcgggcgatggcctggtggcctacctgcgc
tttcccgaatcggaacgcgcggagaagacagcggccgtgtatgcggccgtgcgggaggcc
tcggcgcggcgggtggcgggcgtgcgggtgcgagtggaccccgaactgtag
DBGET
integrated database retrieval system
