Trueperella bernardiae: QPC17_06285
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Entry
QPC17_06285 CDS
T09150
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tber
Trueperella bernardiae
Pathway
tber03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QPC17_06285 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tber03019
]
QPC17_06285 (orn)
03009 Ribosome biogenesis [BR:
tber03009
]
QPC17_06285 (orn)
Messenger RNA biogenesis [BR:
tber03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QPC17_06285 (orn)
Ribosome biogenesis [BR:
tber03009
]
Eukaryotic type
Pre-60S particles
RNases
QPC17_06285 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WIM08909
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All DBs
Position
1344142..1344771
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AA seq
209 aa
AA seq
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MNNDTPIVWIDCEMTGLDLEVDSLVEIAVVVTDAQLNPLDAGLRLVMKPSEQAVAQMDPF
VRNMHTVTGLIDEWDGGLNMADAEEQVLAYVKRFVPEGRKAPLGGNSVGTDRTFLARDMP
LLVDHLHYRVIDVSSIKELAKRWFPRVYFASPEKTGNHTALGDIYDSIDELRYYRAILMP
AGEGPSTEESRAAAKEILADLTRDRAADK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgacacgccaattgtctggattgactgtgaaatgacgggcctcgatctcgag
gtcgactcgctggtagaaatcgccgtggttgtcacggacgcccagctcaacccgctcgac
gccggccttcgcctggtgatgaaaccctccgagcaggccgtagcccaaatggatcccttc
gtccgcaacatgcacactgtcaccggcctcatcgacgagtgggacggcgggctcaatatg
gccgacgccgaagagcaggtgttggcctacgtcaagcgcttcgtacccgaagggcgcaag
gccccgctcggcgggaactcggttggcaccgaccgcaccttcctcgcccgcgacatgccc
ctgctggtcgaccacctgcactaccgggtgatcgacgtgtcctccatcaaggagctcgcc
aagcgctggttcccgcgcgtgtacttcgcctcccccgagaagaccggcaaccacaccgcg
ctcggcgacatctacgactccatcgacgaactgcgctactaccgggccatcctcatgccc
gccggcgaagggccgagcaccgaggagtcccgggccgccgccaaggaaatcctggcggac
ctgactcgggaccgggccgccgataagtag
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