Trueperella bernardiae: QPC17_06975
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Entry
QPC17_06975 CDS
T09150
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tber
Trueperella bernardiae
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tber03400
]
QPC17_06975
DNA repair and recombination proteins [BR:
tber03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QPC17_06975
Archaeal homologous recombinant proteins
QPC17_06975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
RecR_ZnF
Flagellar_rod
Motif
Other DBs
NCBI-ProteinID:
WIM07484
LinkDB
All DBs
Position
1511225..1514353
Genome browser
AA seq
1042 aa
AA seq
DB search
MQFRHLTFSAIGPFPGTHTINFDDLTASGLFLFDGPTGAGKSSIIDAIVFALYGDVAGID
SDRSRMRSSYAPGTVESVVELVFTIASGTYRVRRTPAYLKQKVRGEGTTPIGATAHLWRM
SEAAVEAKKWEAGEILGSKISQVDAELEGLLGLTREQFVQTVVLPQGQFAQFLKMKSTER
AALLETLFNTSDYKRFAYALEDAAKEARGKVKAASEEAIRALHSWLDIDGVAEQFPHLVQ
LVLEPDDEAPLEAIGEADHVLGQAWAAASELTVEVGAAARQAAQALQQAEILTAAIAERG
RLVAERAVLAERAPRIEEARAKIAAHESVALAIDRLNREDSAREALSAIALPAGMASAGA
SGPDAAATEPSATGAVGTPAAGAATVTDIDSLASAIAAQEGVLEAAESVIDSCDAELAGI
NTQLGALAELAALEAGLSQRREELAGLEKEAEALQARAAELDEQLAAYPSRAAEFDSALQ
AKRTLAATAPVITEKLASQQAAQATATKLTDVEGTLERARGTLVKAAAAHSAQREKLNAT
TEAWRRSMASNLASTLSESEPCPVCGSTEHPAPAAPAADSATLEQVQAEEAALAPLAAAL
DQANQKVTALSSSAEALRSQLGDATPESIAATIVALTADLAKASAAEKNAAAMEAERAAL
EDAQAKQRLALGQVREDQRALTERTASASQMLGADTARVSDARGEFPSVHDRQAALGRQR
EQLSSLRAVATTAASAARSLEEARAAASEALAAAHVTAAQARASHLPRPTLTALKKEVED
HAAQCASIEGQLASERLQVEGQEVDLEAARRADAAAREAVSQANRAEAIASQRMTASNGH
LARLHAAHRDWKRISDAAGPAVRLADLANAGSMSLSRVKLTVWVLLRRFEQIVERANEHL
ARFSFGRYELRRADEGRGELKSGLGLEVVHHDSGPGGDHVRSPGTLSGGETFYTSLALAL
ALSEVVQAENGGIRIDTLLIDEGFGSLSSDYLQTVMDTLGQLRADGRTVGVVSHVEELKA
MIPDRVTVKPLDRGGSTMSVSA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccggcacctgactttcagtgcgatcggcccattcccgggcacgcacacgatc
aactttgatgacctgacggcctccggcctgttcctttttgacgggcccacgggcgccggg
aagtcctcaattatcgacgcgatcgtcttcgccctgtacggggacgtggcgggaatcgac
tcggatcggtcccgcatgcgctccagctacgcgcccggcaccgtggagtcggtggtggag
ctcgtgttcaccatcgcctcgggcacgtaccgcgtgcggcgcacgcccgcctacctcaag
cagaaggtgcgcggggagggcaccacgcccataggcgccaccgcacacctgtggcgcatg
tccgaggcggccgtggaggcgaagaagtgggaggccggggagatcctcggctcgaagatc
tcacaggtggatgccgagctggaggggcttttggggctcacgcgcgaacagttcgtgcaa
accgtggtgctcccccagggtcagttcgctcagttcttgaagatgaagtccaccgagcgg
gcggctctgctcgaaaccctgttcaacaccagcgattacaagcgtttcgcctacgccctg
gaggatgcggcgaaggaggcacgcggaaaggtcaaggccgcctcggaggaggccatccgc
gccttgcactcctggcttgatatcgacggggtggccgaacagttcccccacctggtccag
ctcgtcctcgagccggacgatgaggcgccgctcgaggcgatcggggaagccgaccacgtg
cttggccaggcgtgggcggcggcctcggagctgaccgtcgaggtcggcgccgccgcccgg
caggccgctcaggccctgcagcaggcggagatcctcaccgccgccatcgccgaacggggt
cggctggtggccgagcgcgcagtgctggccgagcgtgcgccacgcatcgaggaggcgcgg
gcgaagatcgccgcccacgaatcggtggcactcgccatcgaccgcctgaaccgggaggac
tcggcgcgggaggcgctgtctgctatcgcgctgcccgcgggcatggcgtccgcgggggcg
tccgggccggatgcggctgctacggagccgtcggctacgggtgcggtgggcacaccagcc
gcgggggctgcgaccgtcacggatattgactcgctcgccagcgctatcgcggcacaggag
ggcgtgctggaggccgccgaatctgtcatcgattcctgcgatgcggaactggccgggatc
aacacccagctcggcgcgctcgcggagctggccgcactcgaggccggcctgtcgcagcgc
cgagaggaactggccggtcttgaaaaggaggcagaggcactgcaagcgagggctgccgag
ctcgatgaacagcttgccgcctacccttcgcgcgccgccgaattcgactccgcgctccag
gccaagcgcacacttgccgccaccgccccggtcatcacggaaaagcttgcctcccagcaa
gcggcccaagccacggccacgaagctcacggacgttgagggcacgctcgagcgggcgcgc
gggaccctggtgaaggccgccgccgcgcactcggcccaacgcgagaaattaaatgccacc
acggaggcctggcgcagatcgatggcttccaacctagccagcacgctgagcgaatctgag
ccgtgccccgtttgcggttccaccgagcaccccgctccggccgccccagcggcggattcg
gccacgctcgagcaggtccaggccgaggaggcggcgctcgcgccgctggccgccgcactt
gaccaagcgaaccaaaaggtcacggccctgtccagctctgccgaagcgttgcgttcccag
ctgggcgacgccacgcccgagtcgatcgcggccacgattgttgctctcacggctgacctg
gcaaaggccagcgctgccgaaaagaacgcggcggcgatggaggccgagcgcgcggcgctg
gaggacgcccaggccaagcaacgtctggcactggggcaggtccgggaggatcagcgagcg
ctgaccgaacgtaccgcaagcgccagccagatgctcggggccgataccgcgcgcgtctcc
gacgcgcgcggggaattccccagcgttcatgaccgccaggccgcgcttggccggcagcgc
gaacagctcagcagcttgcgcgcagtggcaacgacggcggcatctgcggcccgctcgctc
gaagaggcccgcgccgcggcgtccgaggcgctcgctgccgcgcacgtcaccgccgcgcag
gcccgcgcaagccacctcccccgtcccacgctcacagcgctgaagaaggaggtagaggac
cacgcggcccagtgcgcaagcatcgaaggccaactggccagcgaacggctgcaggttgag
ggccaggaggtggacctggaggccgcccggcgagccgatgccgccgcgcgggaggcggtc
tcccaggccaaccgtgccgaggcgatcgcctcacagcggatgaccgcctcgaatgggcac
ctcgctcggctacacgccgcccatcgggactggaagaggatcagcgatgcggccgggccg
gccgtccggctggcggatctggcgaacgccgggtcgatgtcgctcagccgcgtcaagctc
acggtgtgggtgcttctgcgccgcttcgagcagatcgtcgagcgagccaacgagcacctc
gcccgcttctccttcggccgctacgagctacgccgggccgacgaggggcgcggggagctt
aagtcgggcctcgggctcgaggtggtccatcacgactccggccctggcggcgaccacgtc
cgctcccccggcaccctctcgggcggcgagaccttctacacctcgctcgccctcgcgctc
gccctgtccgaagtggtgcaggcggagaacggcgggatccgcattgacacgctcttgatc
gacgagggcttcggcagcctgtcgagcgactacctgcaaacggtcatggacacactcggg
cagctgcgagcggacgggcgcacggtgggcgtggtctcccacgtggaggaactcaaggcc
atgatccccgatcgggtcacggtcaagccgctcgaccgcgggggctccacgatgagcgtc
tccgcgtag
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