Trueperella bernardiae: QPC17_09365
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Entry
QPC17_09365 CDS
T09150
Name
(GenBank) Rib/alpha-like domain-containing protein
Organism
tber
Trueperella bernardiae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RibLong
He_PIG
Big_6
TSP_3
Big_9
Gram_pos_anchor
Big_15
DUF4881
Motif
Other DBs
NCBI-ProteinID:
WIM07931
LinkDB
All DBs
Position
2053722..2059268
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AA seq
1848 aa
AA seq
DB search
MSGTTRFIESYASNNTGFEYTGPIEGVKVYVQWREGAGNADFPYSYSPIYYSTADAQGNF
SIDMKPYFDSIGRVRYFEGRVDTGAAGTKDLAGNDSRLGWREKVRIWAELPDGTKADYRL
INHYATSWAPADPTLDNTVMATWDSGKSSIRGVYINYAKNTDNVLAKPDRNDWAVSGEGN
NVGKGLNGSVGGTVFWNANVPNGAIDFSTSMLYQGGADYPLSGITIQGSYLSDEAVAAIK
VHAAAAFAGKTLRGNGWTATDENSLQAWISEQIKADPTWVAETVTATTGADGKYQLYFRG
IYGNSANACGITGDKCHKLADSWDTGSFLNGNLQSKHTNWDWMYVAPVDLPNNVGVMSPW
SIQRWQRVDGRGTWNGANFGQVGFAVGGTIDSVTLADILLSPAPLEFDVVNYDTQLNPAA
PGDTAKTYTGGVLTNENLTYDIVWTDQKGNQVHECTGLTPDTNLSLASCDYQVPADLTAD
TVYTATLYGVNDGQRGASLGSDAFLATRGTELPWGSKYSDYDEEALPKAPDGTTLSGLTA
DGLPDGLSMDPDTGKITGKPTETGRFLVKVTGNASVPRDGADPVDVRLARTYIVVVTDTP
LMAGVRGTEYNQEVTPTGFEDSGYTLGEIKSVDNLPAGLTYNADTKTITGTPTEIVTADE
QQPNVTVTYTVTRETPNGTETKDVTDIVPLPVVAGDSDGDGVPDPADPDNPKPGEDQCPD
TPKGEKVDENGCSLAQLFEPAYADSTAVAGGDPVTVSPTFTKKDTDGTVDAPVGTTFALA
KGAPDWASIDANTGEITFAPGADVAAGPVEVPVVVTYPDNGGTDAVNAKVTVLADSDGDG
VPDPADPDNPKPGEDQCPDTPKGEKVDENGCSLAQLFEPAYADSTVEAGKTATVTPTFSK
KDTDGTVDAPAGTTFALAKGAPDWASIDANTGEITFAPGADVAAGPVEVPVVVTYPDNGG
TDAVNAKVTVTVTDTDGDNVPDGKDQCPDTPEGVKVDETGCAVAPSVPNVPEINGEVNKP
IDPVVVPVANPGKATDLVCTAKGLADGLTIAYDAEKGACVITGTPTAPIDGNYTVTVEGN
RPDGDKGKVSESGTGKIVVTEPGDKDGDGATDDKDQCPDTPEGVKVDETGCAVAPSVPNV
PEINGEVNKPIDPVVVPVANPGKATDLVCTAKGLADGLTIAYDAEKGACVITGTPTAPID
GEYTVTVEGNRPDGDKGKVSESGTGKIVVTEPAAPEPGDKDGDGVTDDKDQCPDTPEGVK
VDETGCAVAPSVTGVPAITGEVNKPIDPVVVPVANPGKATDLVCTAKGLADGLTIAYDAE
KGACVITGTPTAPIDGEYTVTVEGNRPDGDKGKVSESGTGKIVVTEPAAPEPGDKDGDGV
TDDKDQCPDTPKGEKVDENGCSLAQLFEPAYADSTVEAGKTATVTPTFSKKGAEGAVDAP
AGTTFALAKGAPDWASIDANTGEITFAPGADVAAGPVEVPVVVTYPDNGGTDAVNAKVTV
TVTDTDGDNVPDGKDQCPDTPEGAKVDETGCAVVPSVPNVPEINGEVNKPIDPVVVPVEN
PGKATDLVCTAKGLADGLTIAYDAEKGACVITGTPTAPIDGNYTVTVEGKTPDSGKEVNT
SNDGKITVTEPEAPKSPDWGNGSGKPGETVVIPNDGGPVPDGTTVETDGPGKVTIDENGN
VVVDIDKDAKPGDKIVVIVKDKDGNEIDKIEVTVTDPDKQPEADKPNWGDGSVKPGETVV
IPNDGGKVPGDAKVTVEGPGKAQIDKDGNLVITADPNAKPGDKITVTVTDKDGNVLDTST
ITVAGKTAPKSGTGKLSYTGATVGGLAAAATMLTAAGAFLVSRKRRED
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgggcacgacgcgtttcatcgaatcctacgcatcgaataacaccggttttgagtac
accggacccatcgagggtgtgaaggtctacgtgcagtggcgagagggcgccggcaacgct
gacttcccctacagctactccccgatctactactccactgcggacgctcagggtaacttc
tcgatcgacatgaagccctactttgattcgatcgggcgcgtgcgctacttcgaggggcgg
gtcgacaccggcgccgccggcacgaaggatctcgcgggcaacgactcgcgcctcggttgg
agggagaaggttcgcatctgggccgagcttcctgacggaaccaaggccgattaccggctc
atcaaccactacgcaacgtcgtgggcacccgctgatcccacgcttgataacactgtgatg
gcgacctgggattccggaaagtcctccatccgcggcgtctacattaactatgccaagaac
acggacaacgtcctggccaagccggatcgtaatgattgggctgtttccggcgagggtaat
aacgtcggcaagggtcttaatggctctgttggcggaaccgtgttctggaacgcaaacgtt
cccaacggcgccatagacttctccacgtcgatgctctaccagggcggagcggactacccg
ctctctggaatcacgatccagggatcttacctcagcgatgaggcggtcgccgcgattaag
gtgcacgctgctgcggccttcgcgggcaagaccctgcgtggaaacggctggaccgcgacc
gacgagaactcgctgcaggcctggatcagcgagcagattaaggctgatcccacttgggtt
gcagagaccgtcaccgcaacgacgggcgcggacgggaagtaccagctgtacttccgtggc
atctacggaaactcggctaacgcctgtggcatcactggtgataagtgtcataagttggcc
gactcgtgggacacgggctcgttcctgaacggtaacctgcaatccaagcacaccaactgg
gactggatgtacgtcgccccggttgatcttccgaacaacgttggcgtcatgtcgccgtgg
tcgatccagcgctggcagcgtgtcgatgggcgcggaacctggaacggtgccaacttcggc
caggttggattcgccgtcggcggcacgatcgacagtgtgactttggcggacatccttctg
tccccggcgccactcgagttcgacgtcgtcaactacgacacccagctcaaccctgccgcg
cctggcgacaccgccaagacgtacaccggcggcgtgctgacgaacgagaacctcacctac
gacatcgtctggacggaccaaaagggaaaccaggtccacgagtgtacgggtctcacgccg
gacacgaacctgagccttgcctcgtgtgactaccaggtccccgccgacctgaccgccgac
acggtctacaccgccaccctgtacggcgtgaacgatggtcagaggggtgcgtctctcggt
tcggacgctttcctcgccacgcgcggcaccgagctgccgtggggctcgaagtactccgac
tacgatgaggaagcacttcccaaggcaccggacgggacgaccctctctgggctcaccgct
gacggcctgcctgacggcctgagcatggatcccgacaccggcaagatcacgggcaagccg
accgagaccggccgcttcctcgtgaaggtgactggaaacgcttccgttccgcgcgatggc
gccgaccccgtcgacgtccgtcttgcgcgcacctacatcgtcgttgtcacggacaccccg
ctcatggcgggcgttcgcggcaccgaatacaaccaggaagtcacgccgaccggatttgag
gactccggctacacgctgggcgagatcaagtcggtggacaacctgcccgcgggtctgact
tataacgcagacacgaagacgatcaccggcactccgaccgagatcgtcaccgctgacgag
caacagccgaacgtcaccgtcacctacaccgtgacgcgcgagactccgaatgggacggaa
accaaggacgttacggatattgttccgttgccggtggttgccggcgactcggatggcgat
ggggttccggatccggctgatccggataacccgaagccgggtgaggatcagtgcccggat
acgccgaagggcgagaaggtcgatgagaatggttgttcgcttgctcagctgttcgagccg
gcttacgccgattcgaccgctgtcgccggtggcgatcctgtgaccgtttctccgacgttc
acgaagaaggacacggatggcacggttgatgctccggtgggtacgaccttcgctcttgcc
aagggtgctcccgactgggcctcgattgacgcgaacacgggtgagatcacgttcgccccg
ggtgccgatgttgctgctggcccggttgaggtcccggttgtggtgacctacccggacaac
ggtggtactgacgctgttaacgcgaaggtgaccgtccttgctgactcggatggcgatggg
gttccggatccggctgatccggataacccgaagccgggtgaggatcagtgcccggatacg
ccgaagggcgagaaggtcgatgagaatggttgttcgcttgctcagctgttcgagccggct
tacgccgattcgacggttgaggctggtaagaccgccactgtgaccccgaccttctcgaag
aaggacacggatggcacggttgatgctccggcgggtacgaccttcgctcttgccaagggt
gctcccgactgggcctcgattgacgcgaacacgggtgagatcacgttcgccccgggtgcc
gatgttgctgctggcccggttgaggtcccggttgtggtgacctacccggacaacggtggt
actgacgctgttaacgcgaaggtgaccgttacggtgaccgataccgacggggacaatgtg
cccgacggtaaggatcagtgcccggatacgcccgagggtgtgaaggtcgacgagaccggt
tgtgccgttgctccgtcggtcccgaacgttccggagatcaacggtgaggttaacaagccg
attgatccggtcgtcgttccggttgctaacccgggtaaggccactgacctggtctgcacc
gctaagggcctggccgatggtctgacgatcgcttacgacgcggagaagggtgcgtgtgtg
atcacgggtaccccgaccgctccgatcgatggcaactacaccgtcactgttgagggcaac
cgccccgatggtgataagggtaaggtctctgagtccggtactggcaagattgtcgtgacc
gagcctggagataaggacggggacggggccaccgacgataaggatcagtgcccggatacg
cccgagggtgtgaaggtcgacgagaccggttgtgccgttgctccgtcggtcccgaacgtt
ccggagatcaacggtgaggttaacaagccgattgatccggtcgtcgttccggttgctaac
ccgggtaaggccactgacctggtctgcaccgctaagggcctggccgatggtctgacgatc
gcttacgacgcggagaagggtgcgtgtgtgatcacgggtaccccgaccgctccgatcgat
ggtgaatacaccgtcactgttgagggcaaccgccccgatggtgataagggtaaggtctct
gagtccggtactggcaagattgtcgtgaccgagcctgccgctcccgagcctggagataag
gacggggacggggtcaccgacgataaggatcagtgcccggatacgcccgagggtgtgaag
gtcgacgagaccggttgtgccgttgctccgtcggtcacgggtgttccggcgatcaccggt
gaggttaacaagccgattgatccggtcgtcgttccggttgctaacccgggtaaggccact
gacctggtctgcaccgctaagggcctggccgatggtctgacgatcgcttacgacgcggag
aagggtgcgtgtgtgatcacgggtaccccgaccgctccgatcgatggtgaatacaccgtc
actgttgagggcaaccgccccgatggtgataagggtaaggtctctgagtccggtactggc
aagattgtcgtgaccgagcctgccgctcctgagcctggagataaggacggggacggggtc
accgacgataaggatcagtgcccggatacgccgaagggcgagaaggtcgatgagaatggt
tgttcgcttgctcagctgttcgagccggcttacgccgattcgacggttgaggctggtaag
accgccactgtgaccccgaccttctcgaagaagggcgcggagggcgcggttgatgctccg
gcgggtacgaccttcgctcttgccaagggtgctcccgactgggcctcaattgacgcgaac
acgggtgagatcacgttcgccccgggtgccgatgttgctgctggcccggttgaggtcccg
gttgtggtgacctacccggacaacggtggtactgacgctgttaacgcgaaggtgaccgtt
acggtgaccgataccgacggggacaatgtgcccgacggtaaggatcagtgcccggatacg
cccgagggtgcgaaggtcgacgagaccggttgtgccgttgttccgtcggtcccgaacgtt
ccggagatcaacggtgaggttaacaagccgattgatccggtcgtcgttccggtcgagaac
ccgggtaaggccactgacctggtctgcaccgctaagggcctggccgatggtctgacgatc
gcttacgacgcggagaagggtgcgtgtgttatcacgggtaccccgaccgctccgatcgat
ggcaactacaccgtcaccgttgagggcaagaccccggacagtggcaaggaagtcaacacc
tcgaacgatggcaagatcaccgtcaccgagccggaggctcccaagtccccggattggggt
aatggttcgggcaagcctggcgagaccgttgtgatcccgaatgacggtggcccggttccg
gacggcaccacggtcgagactgacggtccgggcaaggtgaccatcgatgagaatggcaac
gtggttgtcgacatcgataaggacgccaagcctggtgacaagatcgtagttatcgtcaag
gacaaggacggcaacgagatagacaagatcgaggtcacggttaccgatccggacaagcag
cctgaggccgataagccgaactggggcgacggttctgtcaagcctggcgagaccgttgtg
atcccgaatgacggcggcaaggtccccggcgacgctaaggtcacggtcgagggcccgggt
aaggctcagatcgacaaggatggcaacctggtcatcaccgccgatccgaatgccaagccc
ggcgacaagatcacggtcaccgtgacggacaaggacggcaacgtcctcgatacgtccacg
atcacggtcgcgggtaagactgcgccgaagtccggcaccggcaagctctcgtacacgggt
gctaccgtgggcggcttggctgctgcggctaccatgctgactgcagctggtgccttcctg
gtgtcgcggaagcgtcgggaggactaa
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