Trypanosoma brucei gambiense: TbgDal_I1840
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Entry
TbgDal_I1840 CDS
T06526
Name
(RefSeq) REL2
KO
K01973
RNA-editing ligase [EC:
6.5.1.3
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
TbgDal_I1840
Enzymes [BR:
tbg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.3 RNA ligase (ATP)
TbgDal_I1840
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GFIT
Motif
Pfam:
RNA_ligase
T4_Rnl2_C
Motif
Other DBs
NCBI-GeneID:
23858252
NCBI-ProteinID:
XP_011771454
UniProt:
C9ZIM1
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Position
1:441675..442925
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AA seq
416 aa
AA seq
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MLRCLGVRHFRRTPLLFVGGDGSIFERYTEIDNSNERRINALKGCGMFEDEWIATEKVHG
ANFGIYSIEGEKMIRYAKRSGIMPPNEHFFGYHILIPELQRYVTSIREMLCEKQKKKLHV
VLINGELFGGKYDHPSVPKTRKTVMVAGKPRTISAVQTDSFPQYSPDLHFYAFDIKYKET
EGGDYTTLVYDEAIELFQRVPGLLYARAVIRGPMSKVAAFDVERFVTTIPPLVGMGNYPL
TGNWAEGLVVKHSRLGMAGFDPKGPTVLKFKCTAFQEISTDRAQGPRVDEMRNVRRDSIN
RAGVQLPDLESIVQDPIQLEASKLLLNHVCENRLKNVLSKIGTEPFEKEEMTPDQLATLL
AKDAMKDFLKDTEPSIVNIPVLIRKDLTRYVIFESRRLVCSQWKDILKRQSPDFSE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgttgcctcggtgtacgtcacttccggcgaacgccgctcctttttgtcggtggg
gacggcagcatttttgagcgctacacagaaatcgacaactccaacgagcggcggattaat
gcgctgaagggatgcggtatgtttgaggatgagtggattgccactgagaaggttcatgga
gcgaacttcggtatctactccattgaaggtgagaaaatgatcagatacgcaaagcgcagt
ggcattatgcctccgaacgagcacttctttggctatcatatattgatccccgagttgcag
cgatacgtaacttctattcgtgagatgttgtgcgagaagcagaagaagaagctacacgtt
gtgctcattaatggagagttgtttggaggaaaatatgaccaccctagcgttccaaagaca
cggaaaacggtcatggtggctggtaagccgcgaacaataagcgccgtgcagaccgactct
tttccccaatatagcccagatctccacttttacgcattcgacataaagtacaaggagaca
gagggtggagactacactactctcgtctatgatgaagccatagagctgtttcagcgcgtt
cccgggctcctgtacgcgagggcggtcattcgagggccaatgtcaaaagttgctgcattt
gatgtggaacgctttgtcacaaccatcccccctcttgttggtatgggcaactacccactg
acgggcaactgggctgaggggcttgtcgtgaagcactcgaggctgggaatggcgggattc
gaccccaaaggtccaacggtgttgaagtttaaatgcacagcgtttcaggagatatccaca
gaccgagcacaagggcctcgcgtagatgaaatgaggaacgtacgaagagactccatcaat
cgcgccggtgtgcaattgccagacttagagagtattgtgcaagatccaattcaactcgaa
gcttcgaaactactccttaatcatgtgtgcgagaatcgtctcaaaaatgtgctatcaaag
atcggcacggagcccttcgagaaggaggaaatgacaccagaccagttggccacacttctt
gccaaagacgccatgaaagactttctaaaagataccgaaccctccattgtaaatataccg
gtactcatccgcaaggatctgactaggtacgttatatttgagtccaggcggctagtctgc
tcacagtggaaggacattctgaagcgtcagtctcctgactttagcgaatga
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