Trypanosoma brucei gambiense: TbgDal_I670
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Entry
TbgDal_I670 CDS
T06526
Name
(RefSeq) rRNA biogenesis protein, putative
KO
K14792
rRNA biogenesis protein RRP5
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_I670
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
90S particles
Other 90S particles
TbgDal_I670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
TPR_14
Nucleo_P87
Clathrin
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
23858469
NCBI-ProteinID:
XP_011771317
UniProt:
C9ZI84
LinkDB
All DBs
Position
1:149619..151658
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AA seq
679 aa
AA seq
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MQYREYRVHHAAPDGILVQLPGNGGFGKLTVETLGGDALAAALLKRFATNDHIRAVARPT
RDVHHYRLLSVQLLELWSGAATYPAPVLSLLLQLFRKHALIGLGTTAMARVVKSSPEKGV
VLSLPGGIPAVAVLENVSEEAGAVEVRLLNYDVQVDVVNVTVQYDVVERTPSDVDALQKL
LTSVTAGSVVSATVLVSCTDDNCAIVEVPCGDECSVIGYYIYNWPGLSAAGDEKPVVGSC
LQLTVEFVPEEPVLQDVLPFFVLSRRQHFAGLPAVRCAILPNTSTPHATVGLVGPFPWRD
KKRDRRPEVEDINDPDDDDSDDDENTNVNRSKIRKRKLEETIDAYERSMETAVPSSPEEF
QRLLLASPNNSYLWVQWMTHHVSLQQFEEARLVAEKALTTIGVRETQERLNVWVAYMNLE
NLHGTAESLASVFKRALRHALDELVVYERLADIFSATRKFNQLLSLCRAMVSKNRKVPRV
WERLGTVLIDHNKRDQLKRVLKDMSDALKRDEYALVVVHLGVHEYRNGSVENGRALFEGL
LLRMPKKSDVWSVYLDQELGLLARRSEVASAVFVRGLFERAVSTSFSAKVMQQVLTRFMS
FERAHGTPADVEKVKARARSYVEAKISASVGSVDPTVKTGGVSVKKGATKDFNATSASAK
GSSVSDEATDKHYDGEAEE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcgtgagtatcgcgtgcatcatgccgcccctgacggtattcttgtgcaactt
ccagggaatggcggctttggtaaattgactgtagaaacactaggaggagatgcattagcc
gctgcacttctcaaacgatttgccactaatgatcacatccgtgccgtggcgcgtccaacg
cgtgatgttcaccactaccggctgcttagcgtacagttgctggagttgtggagcggggcg
gctacttacccagccccggtgttgtctcttctcctgcagttatttcgcaaacacgcactc
atcggtctcgggacgactgcaatggctcgtgtagtgaaatcttcacccgagaagggtgtc
gtcttatcccttcctggtggcattcccgctgttgcagtgctggaaaatgttagtgaggaa
gctggggcagttgaagtacggttgcttaactacgatgtccaggttgatgtggttaatgtg
acagtgcaatatgatgttgttgagcgtacaccaagtgatgtagatgcgctacagaaactt
cttacatcggttactgcgggaagcgtcgtctccgcaactgtactcgtttcatgtacggat
gacaattgcgctatcgtggaggtcccatgcggtgacgagtgcagcgtaatcggctactac
atttataactggccgggtttaagtgctgcaggagacgaaaagccagttgtggggagttgc
cttcagcttactgtggagtttgtgcccgaggagcccgtactgcaggatgttttaccgttt
ttcgtgctctcccgccgtcaacactttgcaggccttcccgcagttcgttgtgctatactt
ccaaacacgtctacaccgcacgccacagtggggctagttggcccttttccgtggcgtgac
aaaaagcgggatcgccgaccagaggtggaggatattaatgatccggatgatgatgatagt
gacgacgacgagaacacaaacgtgaatcgaagtaaaattcgcaagcgaaaactggaggaa
accattgatgcatacgagcggtcgatggagacagcagttccttcttctccggaagagttc
cagcggctcttgcttgcatctcccaacaacagttacctttgggtacagtggatgactcat
catgtatcgttgcagcagttcgaggaggcgcgcctcgtggcggagaaggcattgactaca
attggcgtgcgtgaaacgcaggagcggctgaatgtgtgggttgcgtacatgaatctggag
aaccttcatggtacagcagagtctttggcatctgttttcaaacgagcgttgcggcatgcc
cttgatgaactcgttgtgtatgagcgacttgctgacatattctcagcaacacgaaagttc
aaccaactgctatccttgtgccgggctatggtgtcgaagaaccgcaaggtgccgcgtgtg
tgggaacggcttggcactgttctcattgatcataacaaaagggatcagctgaagcgggtc
ctaaaggatatgagtgacgcccttaaacgtgatgagtatgcattagtggttgtacacctc
ggggttcatgagtatagaaacgggagcgttgagaatggtcgtgctctgtttgaagggttg
ctgcttcgcatgcccaagaagtctgacgtttggtccgtgtatttggatcaagaactgggg
cttctcgcgcgacggtcagaagttgcatcagccgtgttcgtgaggggcttgtttgagcgt
gcggtttccacaagtttttccgcgaaggtgatgcagcaggtattaacgcgcttcatgtca
tttgagcgggcgcacggcacgccggcagacgtggagaaggtgaaggcccgggcgcgaagt
tatgtggaggcaaaaattagtgcatcggttggaagcgtagaccccaccgtgaagactgga
ggtgtgagcgtgaagaagggagcaaccaaagactttaacgcgacatctgcaagcgctaag
ggttcgagcgttagtgatgaggcaacagataaacattatgatggtgaggcggaggagtga
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