KEGG   Trypanosoma brucei gambiense: TbgDal_II3270
Entry
TbgDal_II3270     CDS       T06526                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03040  Spliceosome
tbg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TbgDal_II3270
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TbgDal_II3270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tbg03041]
    TbgDal_II3270
   04121 Ubiquitin system [BR:tbg04121]
    TbgDal_II3270
   03400 DNA repair and recombination proteins [BR:tbg03400]
    TbgDal_II3270
Enzymes [BR:tbg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     TbgDal_II3270
Spliceosome [BR:tbg03041]
 Complex B
  Other components
   Prp19 complex
    TbgDal_II3270
 Complex C
   Prp19-CDC5 complex
    TbgDal_II3270
Ubiquitin system [BR:tbg04121]
 Ubiquitin ligases (E3)
  U-box type E3
   TbgDal_II3270
DNA repair and recombination proteins [BR:tbg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    TbgDal_II3270
SSDB
Motif
Pfam: WD40_Prp19 Prp19 WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st U-box Beta-prop_VPS8 zf-Nse BST2
Other DBs
NCBI-GeneID: 23858728
NCBI-ProteinID: XP_011771885
UniProt: C9ZJM1
LinkDB
Position
2:655115..656644
AA seq 509 aa
MFCCISNCVPHEPVVSRSSGCLYERSLIEKYIAEHGCCPITGEALHKEDLIAVRRTPLTG
ATFVADETVPALLAKLHSQWDAIMLEQFALRQQLTQTQQELAQALHQYEAACRVIATFLS
DGKAEEDTRVVEQTESGAGDGSSEGNRVDEERIVLPGEVVRELEEHDSAQRQRRRTRSMP
TTLATLQCVQGFTERNSVHLGRGACGVSRLVCGNVFVGLDNAAIIRCDVRGGQVQTAGVG
HEGAVRHVVAMSGSCGDGNTSNGALRVISGSDDASLRFWASEGEVLVCQGVVRHHKGGIV
GLRSLTSGRLFLSASSTEVGLVDAVRLDSVVCVNGATMGSSRIISLDAHPYGALAAIGVE
GAGFCIWSTAYMCVDTTVSLKGKGDVCSIAFNGDCFTLATGLRDGKALLWDLRKLSTPFR
EILPEATALKGSALSGAVCTVAFDDYGKYLAVGGCHTRLYDWAAPSEGQQELCTLNTGPQ
SVVGILWDVDAQGLVSCTVDGVVKEYRST
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgttttgttgcatttctaactgtgtgccgcacgaaccggtggtctcacgctcctccggc
tgcttgtacgagcggtcgctgattgagaagtatattgcagagcacggatgttgtccaata
actggtgaggctcttcacaaggaggatctcattgcagtgcgccggacacctctgacaggt
gcaacttttgtggcggatgaaactgtgcctgcattgctcgcgaagttgcactcgcagtgg
gatgccattatgcttgagcagttcgcactgcgacagcaattgacacaaacacaacaagag
ctggctcaggctcttcaccaatacgaagcggcgtgccgagtaattgcgacatttctcagt
gacggcaaggcggaggaggacactcgcgtggtagaacaaactgagtcaggcgcaggggat
ggtagcagcgaaggaaaccgtgtggatgaagaaagaattgtcttacccggtgaggttgtc
cgggaactggaggaacacgactccgcgcagcggcagaggcggaggacccggtcgatgcca
actacattggcgacgctgcagtgtgtgcagggcttcacagagcggaattctgtccatttg
gggagaggagcatgcggcgtcagccgtctggtgtgtggcaatgtttttgttggtttggac
aacgcagctataatacgctgcgacgtacgaggtgggcaggtgcagaccgcgggtgtcggt
cacgaaggagcggttcgtcatgttgtcgccatgtcggggtcttgcggtgacggtaatacc
agcaacggcgctctccgcgtaatatctggatcagacgatgcatcgttgcgtttctgggcg
tctgagggagaggtattggtttgtcaaggcgtagtgcgacaccataagggagggatcgtt
ggtctccgcagtctcacatctggccgcttgttcctatccgcaagttctacagaggttggg
ctggtcgatgcggttcgattggattctgttgtgtgtgtcaacggggcaacaatgggatct
tcgcgaataatcagtctggacgcacatccgtacggggcactggcggcaataggagtggaa
ggagcgggcttttgcatatggtccactgcttacatgtgcgtggacaccaccgtttcgctg
aagggcaagggtgacgtgtgcagtattgcttttaacggggactgcttcaccctagccacc
ggtctgcgcgatggaaaggctctgttatgggacctcagaaaactgtccacacctttccgt
gaaatattgccggaagcaaccgcgctaaaggggtcagctctcagtggtgcagtctgtacc
gttgccttcgatgactacggcaagtatttagccgtgggcgggtgccacacccgcctgtac
gactgggcggcgccatctgaaggtcaacaggagttgtgtacgctgaacacaggcccacag
tcggttgttggcatcctttgggacgttgatgcgcaagggcttgttagctgcactgtagat
ggtgtggtgaaggagtacagatcaacatga

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