Trypanosoma brucei gambiense: TbgDal_II350
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Entry
TbgDal_II350 CDS
T06526
Name
(RefSeq) DNA polymerase delta catalytic subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03030
DNA replication
tbg03410
Base excision repair
tbg03420
Nucleotide excision repair
tbg03430
Mismatch repair
tbg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TbgDal_II350
03410 Base excision repair
TbgDal_II350
03420 Nucleotide excision repair
TbgDal_II350
03430 Mismatch repair
TbgDal_II350
03440 Homologous recombination
TbgDal_II350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_II350
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_II350
Enzymes [BR:
tbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TbgDal_II350
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
TbgDal_II350
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
TbgDal_II350
MMR (mismatch excision repair)
DNA polymerase delta complex
TbgDal_II350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
POL3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
23858745
NCBI-ProteinID:
XP_011771634
UniProt:
C9ZIW0
LinkDB
All DBs
Position
2:48543..51623
Genome browser
AA seq
1026 aa
AA seq
DB search
MTDSPDLSRPPVPPDYLQSDLLFQLLDCCQTQGSPHGIVSTVKHEDVPIVRIYGVTKEGH
SVLVHCYNFEPHLWIRAPNRWLDVYSKTFVQELNASLDPLTHVSNTVVRIERHKRRSLMY
YNPDGECDYLKVIVQLPQHIPRLRTLLSSGVMCVGAWEGLRAFPTFESNVIFPLRFMVDG
NIGGCNWITVPAGQFHLFSPRTSTCQIEVCCSHEVLQSHEAVGDYLLIAPFRILSIDIEC
EGRKGLFPEAERDPVIQIANHCVNYGKEEDALTRTIFTLKSCGAIAGANVCSFETEEEML
VQWARFVKRIDPDFLTGYNICNFDFPYLLSRGITLKVNDSFFYWGRQLNERTVHREKKFL
SRQLGNREYTELTMEGRVVMDVMAVIQRDYKLRAYSLNAVSQHFLGEQKEDVHHSIISDL
QQGNDETRRRLAVYCLKDAYLPVKLLERLMVVVNNVEMARVTGVPIGWLLERGQQIKVFS
MLLRKARARNFVVPTVETTGAEQRRYEGATVIEPKKGHYIEPIVTLDFASLYPSIIIAHN
LCYSTLLPGHEVNNYESGMKEDTPTEHKFIRKEVFPGVLPEVLRDLLAARRQARALMKDV
SQDSLEYKVLNGRQLALKVSANSVYGFTGAQVGRLPCLELSATVTSYGRRMIEETKQFVE
KKYVGAEVIYGDTDSVMIRCVINADESDTNKLQQAMDFGKEAAEAVSSTFPDPIRLEFEK
VYYPFLLMNKKRYAGLLWTNTVRYDKLDAKGIETVRRDSCPLVASVISGVLNRMLIQRSV
ESAVEFVKGTIRDLLHNRLDISQLVITKSFSKSESEYAGAQAHIALVERMRRRDPASAPN
VGDRVAYVIVRAAKGAKAYERSEDPIYVLENNIPIDTQHYLEHQLGPPLLRVFEGVLQDP
SVLTKGDHTRYVSVSAPNRNAGGLMKFVKFQLQCISCRSVIQEGALCDACSVMGPDIYGK
IVAKRNHYEAVYSQVWTQCQQCQGSLNQEVICTSRDCPVFYLRKKVQKDVHEQQTLLDRF
GVVDDW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcacctgatctctctcgcccacctgtgccacccgattaccttcagagcgac
ttactctttcaactgctcgactgctgtcaaactcaaggcagtccccatggcatagtttca
actgttaaacacgaggatgtcccaatcgtgcgtatttacggcgtgaccaaggagggtcac
agtgttcttgtacactgctacaactttgaaccccatctgtggattcgtgcccccaatcgg
tggcttgacgtatactcgaaaacgttcgtgcaagagttaaacgctagtttggacccgcta
actcacgtgtccaacacagtggtgcgcatcgagaggcacaagcgcaggagcctcatgtat
tacaatccggatggtgaatgtgattaccttaaggttattgttcagctcccacagcacatt
ccaaggttgcgcacgcttctttcctctggcgtgatgtgtgtcggtgcgtgggaagggcta
cgtgcgtttccgacatttgaaagcaacgtcattttcccgttgcgctttatggtagatggc
aatattggaggttgcaactggattactgtcccagcgggccagtttcacctgttcagccca
cgtacttcgacttgtcagattgaggtctgttgttctcatgaagtgctgcagagtcacgaa
gcggttggagattaccttttaattgctcccttcaggatcctttctattgatattgaatgt
gaggggagaaaaggcctctttcctgaggctgagagggaccctgttattcaaatcgctaat
cactgcgtcaattacggcaaggaggaggatgctcttacgcgaactatcttcacgctcaag
agttgtggagctattgccggtgctaatgtgtgctcgtttgagactgaagaagagatgctc
gtgcaatgggctcgcttcgtcaagagaattgaccccgattttctcactggctataacata
tgcaatttcgatttcccgtatcttctttcccgtggaatcacgctgaaggtgaatgacagc
tttttctactgggggaggcaactcaacgagcggacagtgcatcgtgaaaagaagttcctc
tcacgacaactggggaatcgtgaatatacggaattgacgatggagggccgtgttgtcatg
gacgtgatggctgtcatacagcgtgactataagctgcgcgcctactctctcaatgctgtc
tcgcaacacttcctgggggagcagaaggaggacgttcaccactccatcatttcggatctt
cagcagggaaatgatgagacacggcggcgcctggcagtgtattgcctaaaagatgcctat
ttaccggttaagcttttagaacgactgatggttgtggtaaataatgtggagatggcccgt
gtgacgggtgtaccgattggttggctactggaacgcggtcaacaaattaaggttttctcc
atgttgttgcgtaaggcgcgggcaagaaattttgtggtccccacggtggaaactacagga
gctgaacagcgtcgttacgaaggcgctaccgtcatcgagcctaagaaggggcactacatt
gagccaattgttacattggactttgcctcactctatccttccatcatcattgctcacaac
ttgtgttactcaacgctgcttcctgggcatgaggtgaacaattacgagtcagggatgaag
gaagacacccccacggaacacaagtttatccggaaggaggttttccccggtgtgttgccc
gaagtcctgcgggatctgcttgccgctcgaaggcaggcccgagcgctaatgaaggatgtt
tcgcaggactctcttgaatacaaggttcttaacggccgtcagctggcgctgaaggtgagc
gctaattctgtctacggattcactggcgcccaggtgggtaggttgccgtgtttagagttg
agtgcgactgtgacgagctacgggcgaaggatgattgaggagacaaagcagttcgtagag
aagaaatacgtgggagcggaggtgatttatggtgatactgactctgttatgattcgatgc
gttataaatgccgatgaaagtgacaccaataaattgcaacaggcgatggattttggaaag
gaagctgcggaggctgtgtccagcacctttccggaccccatcaggttggaattcgaaaaa
gtgtactaccctttcttactaatgaataagaagcgctacgctgggttgctatggaccaac
accgtgcggtacgacaagttggatgcaaagggaatagagaccgttcgtcgggacagttgc
ccgcttgtcgccagcgtcatctccggagtgcttaaccgaatgctgattcagcgctccgta
gagagtgcggtggagtttgtgaagggaacgattcgcgatctcctacataaccgactcgac
atctcgcagctggtcatcacgaagtctttctccaagtctgagtccgagtacgctggagca
caggcccatattgccctggtggagcgcatgcgaaggcgagaccccgcttctgccccgaac
gttggtgaccgcgtggcgtatgtgattgtccgcgccgccaagggggccaaggcgtatgag
cgcagtgaggatcccatatacgtgctggaaaacaacattcctatcgatacgcagcattac
cttgagcaccaactcgggcctccgctccttcgtgtttttgagggtgttcttcaggacccg
agcgtgttgacgaagggagatcacacgcggtacgtttctgtttcggctccgaacaggaac
gcaggggggctgatgaagtttgtgaagtttcaactccagtgcatttcttgtcgttctgta
atacaggaaggggccctgtgcgatgcgtgcagcgttatgggtcccgacatttatgggaag
attgtagcgaagcgcaatcactacgaggctgtttattcacaggtatggacacagtgccaa
caatgtcagggatcactgaatcaagaggtaatttgcacgagtagagattgccccgtgttt
tacctgaggaagaaagttcagaaagatgtgcatgagcagcaaacactcctggatcgcttc
ggtgtagtggacgattggtga
DBGET
integrated database retrieval system
