Trypanosoma brucei gambiense: TbgDal_II4110
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Entry
TbgDal_II4110 CDS
T06526
Name
(RefSeq) small nuclear ribonucleoprotein SmD2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TbgDal_II4110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbg03041
]
TbgDal_II4110
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_II4110
Spliceosome [BR:
tbg03041
]
Complex A
U1 snRNP components
Sm proteins
TbgDal_II4110
U2 snRNP components
TbgDal_II4110
Complex B
U1 snRNP components
TbgDal_II4110
U4/U6.U5 tri-snRNP components
TbgDal_II4110
Complex C
U2 snRNP components
TbgDal_II4110
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TbgDal_II4110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
23858792
NCBI-ProteinID:
XP_011771939
UniProt:
C9ZJS5
LinkDB
All DBs
Position
2:800036..800371
Genome browser
AA seq
111 aa
AA seq
DB search
MSGEEPTKLQRTESGARVIKTKEFLRTSVAEGPFCLLDSAVKNGTRVFIQSRYNKSLVAT
VVAFDKHFNLVLRDAVELTMVNNEQKERSIRNMFLRGASVVFIVRLPQSAV
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgaggaacccactaaattgcagcgaacagagtctggtgcgagggtgatcaaa
accaaagaatttcttcgtaccagcgtcgccgagggccctttctgtctcctcgacagtgct
gtgaagaatggaacacgcgtgttcatccagtcccgctacaacaagtccctcgtcgcaacc
gtcgttgccttcgacaaacactttaacctcgtgttgcgggatgctgtggagttaacaatg
gtcaacaatgagcagaaagagcgctccattcggaacatgttcttgcgtggcgcctctgtg
gtgttcatcgtgaggttgccgcagagcgctgtatag
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