Trypanosoma brucei gambiense: TbgDal_III1850
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Entry
TbgDal_III1850 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K12816
pre-mRNA-processing factor 17
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TbgDal_III1850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbg03041
]
TbgDal_III1850
Spliceosome [BR:
tbg03041
]
Complex C
Other components
Step II factors
TbgDal_III1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
23858957
NCBI-ProteinID:
XP_011772139
UniProt:
C9ZK82
LinkDB
All DBs
Position
3:complement(426479..428038)
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AA seq
519 aa
AA seq
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MPLSLRPPLPLLFYCKYYNCCFCSFVSPCLTRLTCTCGEAMLFDLAPHIDPKVLQRVARE
KGYTLPVSEDSSEQRKQDAIADLHAGLPLRFLATPEDVKRAYLPPPEGFEEAYVKKTDGS
GLPEKRTTQPVARKRVRSGEGPAQVGVSDSATPAVISAAGATEVNTNVSTSVAANTLQAN
FDPSFERTNYLGRSFLEPPPSLQPRSHECRLPRQMKGSCDKHAAGIQQLQWLPPVGHLLF
AADLKGEVRLYETFSSRRQCIASFVAHSQPVKSLEVTPDGETMSTGSVDGTVAMWDVEHG
ECRGVLTNSEQLPCVQHLHHPLDPTSLILVALDRKVVLYDVRVSYQKYQREYTGHMGTIF
NLSLLSGGKKLLTTAEDKTLRTWDFRVPVQIKQIADVSMHAITHVVRHPTEDMLVAQSLN
NQALVFSDGGGGQVKLLRHRVFSGHTISGTRCQLAFSPDGRYLSSGDINGKLFIWSWATG
ELLRSFSAHTQTLVSHRWHPVESSRVVTSAWDGAIKTWA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccgctatcactccggcctcctcttccattactcttttattgtaaatactataactgt
tgcttttgttcttttgtttctccttgtttaacccgtcttacgtgtacctgcggtgaagcg
atgctttttgaccttgcaccgcacattgatcccaaagtcctgcagcgtgtggctcgagag
aagggatatacgttgcccgtttccgaggatagttctgaacaacggaagcaagacgcgatc
gcagatctgcacgccggacttccgctgcgttttttagccaccccggaggatgtgaaacgg
gcatatttgcctccgccggaggggtttgaggaggcttatgtgaaaaaaactgatggcagc
ggattacctgagaagcgaaccactcagccagtggcgcgcaagcgggtacgaagtggtgaa
ggacccgcgcaggtgggggtctccgattcagccacacctgcggttatttctgctgctggt
gctacagaggtgaatactaacgtctccacctctgtagcggcaaatacacttcaagctaat
tttgatccatcatttgagcgcaccaattacttgggcaggtctttcttggagcctccccca
tcgctgcaaccgcgctcgcatgagtgccgtctcccgcgacaaatgaaaggcagttgcgac
aagcatgcggcgggcattcaacagcttcagtggctacctcccgttggtcatttgttgttt
gccgctgatttaaagggtgaggtgaggctttacgagaccttctcttcccgccgtcagtgc
atcgcttcatttgtagcccattcacaaccagtgaaatccctagaggtgactccggatggg
gaaacaatgtccacaggttctgttgatgggacggttgcgatgtgggacgttgaacatggt
gagtgccgaggcgtgctgacgaattcggagcagcttccctgcgtgcagcacctgcatcat
cctctagatccaacttccttaatacttgtagcactagacaggaaagtggtcctttatgac
gtgcgggtgagttaccagaagtaccaacgcgagtacacgggccatatggggaccattttt
aatctctcgctgcttagtggagggaagaaacttttaacgacagcggaggacaagacgctc
cgcacgtgggactttagggttccagttcaaatcaaacagattgcggatgtctctatgcat
gccatcactcatgtcgtgcggcaccccacagaagacatgcttgttgcccaatcgctcaac
aatcaagcacttgtattctctgatggtggtggaggacaagtgaagttacttcgtcatcgt
gtatttagcggccacacaatttcaggcacgcgttgccaactggcatttagtcctgatggc
cgctatttgtcgagtggtgacatcaatggtaagttgtttatctggtcgtgggctactggt
gagctactacgatctttttcagcccacactcaaactcttgtgtcgcatcgctggcaccca
gttgagtcttcccgcgttgtcacctcagcgtgggatggtgccattaagacatgggcgtga
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