KEGG   Trypanosoma brucei gambiense: TbgDal_III1850
Entry
TbgDal_III1850    CDS       T06526                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K12816  pre-mRNA-processing factor 17
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TbgDal_III1850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tbg03041]
    TbgDal_III1850
Spliceosome [BR:tbg03041]
 Complex C
  Other components
   Step II factors
    TbgDal_III1850
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C WD_LRWD1 Beta-prop_SPT8 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 23858957
NCBI-ProteinID: XP_011772139
UniProt: C9ZK82
LinkDB
Position
3:complement(426479..428038)
AA seq 519 aa
MPLSLRPPLPLLFYCKYYNCCFCSFVSPCLTRLTCTCGEAMLFDLAPHIDPKVLQRVARE
KGYTLPVSEDSSEQRKQDAIADLHAGLPLRFLATPEDVKRAYLPPPEGFEEAYVKKTDGS
GLPEKRTTQPVARKRVRSGEGPAQVGVSDSATPAVISAAGATEVNTNVSTSVAANTLQAN
FDPSFERTNYLGRSFLEPPPSLQPRSHECRLPRQMKGSCDKHAAGIQQLQWLPPVGHLLF
AADLKGEVRLYETFSSRRQCIASFVAHSQPVKSLEVTPDGETMSTGSVDGTVAMWDVEHG
ECRGVLTNSEQLPCVQHLHHPLDPTSLILVALDRKVVLYDVRVSYQKYQREYTGHMGTIF
NLSLLSGGKKLLTTAEDKTLRTWDFRVPVQIKQIADVSMHAITHVVRHPTEDMLVAQSLN
NQALVFSDGGGGQVKLLRHRVFSGHTISGTRCQLAFSPDGRYLSSGDINGKLFIWSWATG
ELLRSFSAHTQTLVSHRWHPVESSRVVTSAWDGAIKTWA
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgccgctatcactccggcctcctcttccattactcttttattgtaaatactataactgt
tgcttttgttcttttgtttctccttgtttaacccgtcttacgtgtacctgcggtgaagcg
atgctttttgaccttgcaccgcacattgatcccaaagtcctgcagcgtgtggctcgagag
aagggatatacgttgcccgtttccgaggatagttctgaacaacggaagcaagacgcgatc
gcagatctgcacgccggacttccgctgcgttttttagccaccccggaggatgtgaaacgg
gcatatttgcctccgccggaggggtttgaggaggcttatgtgaaaaaaactgatggcagc
ggattacctgagaagcgaaccactcagccagtggcgcgcaagcgggtacgaagtggtgaa
ggacccgcgcaggtgggggtctccgattcagccacacctgcggttatttctgctgctggt
gctacagaggtgaatactaacgtctccacctctgtagcggcaaatacacttcaagctaat
tttgatccatcatttgagcgcaccaattacttgggcaggtctttcttggagcctccccca
tcgctgcaaccgcgctcgcatgagtgccgtctcccgcgacaaatgaaaggcagttgcgac
aagcatgcggcgggcattcaacagcttcagtggctacctcccgttggtcatttgttgttt
gccgctgatttaaagggtgaggtgaggctttacgagaccttctcttcccgccgtcagtgc
atcgcttcatttgtagcccattcacaaccagtgaaatccctagaggtgactccggatggg
gaaacaatgtccacaggttctgttgatgggacggttgcgatgtgggacgttgaacatggt
gagtgccgaggcgtgctgacgaattcggagcagcttccctgcgtgcagcacctgcatcat
cctctagatccaacttccttaatacttgtagcactagacaggaaagtggtcctttatgac
gtgcgggtgagttaccagaagtaccaacgcgagtacacgggccatatggggaccattttt
aatctctcgctgcttagtggagggaagaaacttttaacgacagcggaggacaagacgctc
cgcacgtgggactttagggttccagttcaaatcaaacagattgcggatgtctctatgcat
gccatcactcatgtcgtgcggcaccccacagaagacatgcttgttgcccaatcgctcaac
aatcaagcacttgtattctctgatggtggtggaggacaagtgaagttacttcgtcatcgt
gtatttagcggccacacaatttcaggcacgcgttgccaactggcatttagtcctgatggc
cgctatttgtcgagtggtgacatcaatggtaagttgtttatctggtcgtgggctactggt
gagctactacgatctttttcagcccacactcaaactcttgtgtcgcatcgctggcaccca
gttgagtcttcccgcgttgtcacctcagcgtgggatggtgccattaagacatgggcgtga

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