Trypanosoma brucei gambiense: TbgDal_III230
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Entry
TbgDal_III230 CDS
T06526
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tbg01009
]
TbgDal_III230
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_III230
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TbgDal_III230
Protein phosphatases and associated proteins [BR:
tbg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TbgDal_III230
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Helicases
TbgDal_III230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
23859008
NCBI-ProteinID:
XP_011771977
UniProt:
C9ZKU1
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All DBs
Position
3:complement(<83090..>85756)
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AA seq
888 aa
AA seq
DB search
MRLPIIVQFITFHHLLAFFFYYFLSPPPPPPPPPPLFTILKTEETKGVCRGKVKEKETVK
AEKKIFMSLAGSERAHLCVHGLTENDEQDALRHLLSATGSSQLTDISDEVVVKGAAKRKN
QAATQYANSSESIKGKKTQHSSEVQQQKPDGGTVGRVKKSSDVPVKRTASKVVPVPKEVE
AESVAFQADSVSHEAESLPPIAELVHKKLIRPLTEVLCINSLTRIQKLSWMPMVDKTRDV
LVRSETGSGKTLAYALPLLHQLLCDCDTRPLKRDVGSVIIVLCPVRELVVQVSDVLTILT
RCALFLTVGGIHGGENRHKEKARLRKGITILATTPGRLLDHLKATSSFRVEELQTIVLDE
ADRLLDMGFEKTIREVMDLLVAKKRDAHQTGGGDAQSSFKRVLVSATITAAVERLSHFAL
RDNIVRVGETEDTFSIPSSLRQHYVLVPTKHRLATLISFLRSQLDAGAQRLIVFVSTADS
AEFHYYLLSRLKSPFRGKTNSGRSAGAPQKNSNRYSLKKRIGEANRHIHEGRDEDVVTFD
DDSDDEDPTEVNELSEKNAVLDVNIFKLHGNMSQVDRASVFHAFKHMDSSVQPSKKGILF
CTDVAARGLDMPNVDWIVHYDPPTDAPCYIHRIGRTARIGNTGDSMLFLMPHEEGYASYL
SNFLAKETKLGSMAKGANAESGIIEERKYESFLFYLTKLDPKANHMWAQSTATLERAICR
LVMKRHSNEENVNDESTGRTDDITRLALFAYQSYIRAYAGHSRELKRLFFNSDALHLGHV
AQNFGIDKRPSEVRSQLQGLIKEDRKVARETTSVVLDDGSERPRKVLRTEVPHDDRYRST
VVQNNAKLRGIGMKTKRNWRVQHINTSNLLNSMPKSWEMMMRRNIFFL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgcccattatcgtacaatttattacattccaccatctactggccttctttttt
tattattttttatcccccccccctcctcctcctcctcctcctcctctcttcaccatccta
aaaacagaagaaaccaaaggggtttgtcggggaaaagttaaggaaaaggaaactgttaaa
gcggaaaagaaaatatttatgtcactagcgggttccgagagggctcatctctgtgttcac
ggccttacggaaaatgacgaacaagacgcacttcggcatttactctctgctaccggttca
tctcagttaactgatattagtgacgaagtggttgtgaagggtgctgccaaaaggaaaaac
caagcggcaacgcaatatgcaaattctagcgaatctataaaaggcaaaaagactcaacat
tcttcggaagttcagcagcagaaacccgacggtggaacggtgggacgtgtgaaaaaatca
agtgacgttcccgtaaaacgaacagcttcaaaagtagtgccggtaccgaaagaagttgag
gcggagtccgtggcgtttcaagcagatagtgtaagccatgaagccgaatcacttcctccc
atagcagaacttgtgcacaagaagttgattcggcccttaacagaagttttgtgcattaac
tcgttgacgcgcatacaaaaacttagttggatgcccatggttgataaaacacgtgatgtt
ctcgtcagaagcgagacgggaagcggtaaaactttagcgtatgcgcttcctctgcttcat
caattgctctgcgattgcgacacccggccactgaagcgtgacgtcggttctgtcattatt
gttttgtgtccagttcgagagttggtagtacaggtgtcggatgtactcactattcttacg
cgttgtgccctcttccttacggtaggcgggattcatggaggtgagaataggcacaaggaa
aaggcgagactacgaaaaggaataacaattttggcaacgacgcctggaaggcttttggat
catctcaaggccacatcatcctttcgagtagaggagttgcaaactattgtgttggatgag
gctgatcggttactcgatatggggttcgaaaagactattcgtgaggttatggatttgtta
gtagcgaagaaacgggacgcacaccaaacaggcggcggggacgcgcaatcctcgtttaaa
cgagttctcgtttcggccaccataacggcggctgttgaacgactctctcattttgcgcta
cgggataatattgttcgcgttggtgagacggaggacactttttctattccttcatcgttg
cggcaacactatgtattggtaccaacaaagcaccgcctggcaacactcataagctttctt
cggtcgcagttggacgctggagctcaaagacttatcgtttttgtttcaactgcagacagt
gctgaatttcattattatttgttgtccagattgaagtcaccttttcgtggcaagacaaac
agtggcagaagcgctggcgcacctcaaaaaaactcaaatcgctacagcttaaaaaagcgt
attggggaagccaataggcacattcacgagggtcgagatgaggacgttgtcacttttgat
gatgactcggatgatgaggatccgactgaagtaaatgaattatccgaaaaaaatgctgtt
cttgacgttaacatatttaaactgcacggtaatatgtcacaagttgatcgagcctctgtt
ttccatgccttcaaacatatggacagcagcgttcaaccttccaaaaagggaattctcttt
tgcacagacgttgccgcgcgggggcttgacatgcctaatgttgattggattgtgcattat
gatcctcctactgatgcgccgtgttacattcatcgcattggccgcacagcacgtattggt
aacacgggggattccatgttatttctcatgccacacgaggaggggtatgcatcttatttg
agtaacttcttagcaaaggaaactaaattaggttccatggcgaaaggtgccaatgccgaa
tcgggaatcatagaggaaaggaaatatgagtcattcctcttttatttaactaaattggat
cccaaagccaatcacatgtgggctcagagcactgcaactttggagcgcgccatatgccga
ctagttatgaagcggcattcaaacgaagaaaatgtgaatgatgaaagcaccggcagaact
gatgacatcaccagacttgcattattcgcctatcagtcatacataagagcatacgccggt
cattccagggaacttaagcgtcttttcttcaattccgatgcccttcatttgggtcatgtc
gctcaaaactttggtattgacaaaagacccagcgaagttcgctcacagttgcaaggactc
attaaggaagatagaaaagtggcaagagaaacaacatcagttgtgttggatgatggcagt
gagcggcctcgaaaagtgctacgcacggaggtgccacatgatgaccgctataggagcaca
gtggttcaaaacaacgcaaagttacgagggattggtatgaaaacaaaaagaaactggagg
gtccaacatataaacaccagcaatttactgaattcgatgcctaaatcatgggaaatgatg
atgaggagaaacatcttctttctgtaa
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