Trypanosoma brucei gambiense: TbgDal_III5790
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Entry
TbgDal_III5790 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_III5790
03036 Chromosome and associated proteins [BR:
tbg03036
]
TbgDal_III5790
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
TbgDal_III5790
Chromosome and associated proteins [BR:
tbg03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
TbgDal_III5790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
FecR_C
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
23859391
NCBI-ProteinID:
XP_011772527
UniProt:
C9ZKM1
LinkDB
All DBs
Position
3:1315651..1317939
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AA seq
762 aa
AA seq
DB search
MDLKENRRSCTFHGEPTDTGDGNAYSDTQCCSTSSCIDTVQYIGSKASGVEPTFGDGLKL
HDTTHSGREGHRFQSNRAPAISNQEKCRTVRFIAAQWLSLLMNESPNVAMPPSLRGRRNQ
TRRRRRQQQQHQQQVTRRDEELSGPDGRDNVMAEEVDSDESYSQKKILPIGVTKKGASPT
LTGNDNRQVEEPRTMTGNDTPTSSFELVPREETLPQLMAVLREVALAGASLSDLSPVGDE
GEMSTSQSVSEKAEASVADVVTGSSNSGCTPAQTQDELLWKDIRKQLNQVCKLVHNRSEL
AAELNSTLGNDWYLSDDELRKDETPLKDYCFQLPPPQVSCVDTHSAAAASSEREASEPME
QQQQFQKQECTDRTRTVAVASAGSRLNRDAPPFHSRLYVPTHLSSSSTISADAPVYYPGG
TSSPGKQKELSSPSVAHQRPSFTQTAESSSLGGASVGSPTVPLTTSAGASAASNVGSSTT
SPSVTFNLESREGMIRRRTAAAAAAAVAANHYVHNSGGNFYSGGRSRGGWGNSHSPVVTY
MNCALSLSQCPFDYLLVVDFEATCEEYAPPSYLHEIIEFPVVVVDAKLQRVITEFHRYVK
PKVKPQLSEFCRQLTGIRQEDIDSAAPLEDVIKQFERWYAQTIPPGSRTVLVTDGPADLR
EFMYVHSVTRQGIRFPSMFYQWIDVKQVFAHFFQCQQGKIKAMLEVLQCPFEGRLHSGID
DARNIAKIVIRMLEVGCSFCEIPLCRLPYGTTTTAAAGPAQE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaggagaaccgtagaagttgcacgtttcatggtgagccaacagacacaggt
gacggaaatgcctattccgatacgcagtgctgcagcacttcatcatgcatagataccgtg
cagtatattggttctaaagcaagtggtgtggaaccaacctttggtgatgggttaaagtta
cacgacacaacacactcagggcgtgagggtcatcgctttcaatccaatagagctcccgct
atttctaaccaggaaaagtgccgtacggtaaggttcattgctgcgcagtggctttcgttg
ttgatgaacgagtcacccaacgtggcgatgccgccttctctccgaggtcgtaggaaccaa
acgcgtcgccgtcgccgtcaacaacaacaacatcagcagcaggtcaccaggcgggatgag
gagttatccggacctgatgggagggacaatgtgatggcagaggaggtcgatagtgatgag
agttactcgcaaaagaagattcttcctattggcgtcaccaaaaaaggtgcatcaccaacc
ctcactggaaatgacaacaggcaagtggaggaaccccgcaccatgactgggaatgataca
cccacatcttcgtttgagttagtgccacgggaagaaacactcccgcagcttatggccgtg
ttgagggaagttgccctggcgggtgcttctttatctgatctctcgccagtaggagatgag
ggggagatgagtacttcacaatcggtaagcgagaaagcggaggcgagtgtggctgatgta
gtcacaggttcgagtaacagtggttgcacacccgcacaaacccaagacgaattgttatgg
aaggatattcgtaagcagttgaaccaagtgtgtaaactggttcacaatcgcagcgagcta
gcggcagagctaaacagcaccctcggtaacgactggtatttgagtgatgatgaacttcgc
aaggatgaaacgcccctcaaggattattgtttccagcttcctccaccacaggtaagttgc
gttgacacccactcagccgctgctgcatcatctgagagggaggcttcagagccaatggaa
caacagcagcaatttcaaaagcaggagtgcaccgatcgtacccgcactgtggctgtcgcc
tctgccgggtctcgattaaatcgggacgcacctccgtttcactcccggttgtacgtgcca
acacaccttagttcttcctctacaatttcggcggatgcgcctgtttactatccggggggt
acatcatcacccggtaaacagaaagaattgtcttcaccttcagttgcacatcagcgtcct
tctttcacacagactgcggaaagcagttccttaggtggtgcgtcggttggttcacccacg
gtgcctctcaccacctctgcaggggcatcggcagcgtcaaatgtgggctcctccacaact
tcgccgagcgtaacgtttaatttagagtcgcgtgaaggtatgattcgcaggaggacggct
gcagcagcagcagcggctgtggccgcaaatcattatgttcacaactcgggaggtaatttt
tatagcggtggtcgttcccggggtggttggggtaactcccattcaccggtggtgacttat
atgaactgtgcactgtccctctcgcagtgtccttttgactatttacttgttgtagatttt
gaggcgacgtgtgaagaatacgcgccaccatcgtacttacacgaaataattgagtttcct
gtggttgtggttgacgccaagctgcagcgcgtcataacggagtttcaccgctacgtgaaa
cctaaggtgaaaccgcagctgagtgaattctgccgccaacttaccggcatccggcaggag
gacattgatagcgccgctccactggaagatgtaatcaagcaatttgaacgctggtacgcg
caaacgataccaccgggtagccgtaccgtattagtaacagacggacctgcggaccttcgt
gaatttatgtacgtgcatagtgtgacacggcaagggatccgcttccccagcatgttttac
cagtggattgatgtgaagcaggtctttgcccactttttccagtgtcagcaggggaaaata
aaggccatgctggaggtccttcagtgtccttttgaggggcgactccacagtggcattgac
gacgcgagaaatattgcaaaaattgttattcgaatgctggaggttgggtgctctttttgc
gagattccgctttgccggcttccatatggtaccacaaccactgcggctgcaggcccagct
caggaatga
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