Trypanosoma brucei gambiense: TbgDal_IV3910
Help
Entry
TbgDal_IV3910 CDS
T06526
Name
(RefSeq) nucleolar protein, putative
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_IV3910
Enzymes [BR:
tbg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
TbgDal_IV3910
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TbgDal_IV3910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
Methyltransf_31
PCMT
TRM
GCD14
DUF1993
Motif
Other DBs
NCBI-GeneID:
23859830
NCBI-ProteinID:
XP_011772980
UniProt:
C9ZN38
LinkDB
All DBs
Position
4:complement(958365..960104)
Genome browser
AA seq
579 aa
AA seq
DB search
MSKPDRKVKNSKKEVPVAKIKRGSGNATQKRPKKSQAQRKQHHLEELGSDNSDVMSGNGG
ISGNYAPYEENEEVEYNDEEFGSYEEEESDYFSDGEEVEDDDDFEAKAIKFRQQMDKLHS
EAAAEQEGDIRSRTAKPTLFGDAEEQEEDGEQVQLLGQQHTVEELRDRIGETVHVLSHFK
EEREEGRTREDYMQLLRADIMELYGYNEFLTDSILLLFSPTEAVEFFEAMEKPRPTTIRV
NTIKAKRRDLVQALVKRGMNVEPLEKWSKVGLQVFESNVPISGTVEYLAGHYMLQSAVSF
LPVMALAPQINERVLDMAAAPGGKTTYIAQLMKNTGVIFANDVSEPRTKSLNANLQRLGV
TNTVVTNYDGVGFEKVMKNFDRILLDAPCTGSGIISRDKSIKTSKQYEDVQRASQLQRSL
LLSAIDAVRVGGYIVYSTCSFLVEENEAVVDFVLHRRDVAIVEAGLPFGRPGLTKYRHHR
FHDKLQNARRLFPHVHNMDGFFVCKLKKLSNNPGGPSTNGLKKEESNVAKSGNVKTMKGT
NKRQREDDSKAKGELKTKNNRISVPPATKKSPKSKGKSG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggatcgaaaggtgaagaactccaaaaaggaggtacctgtggcaaaaata
aagcgagggagcggaaacgcgacccaaaaacgcccgaaaaagtcacaagcacagcggaaa
caacaccacttagaagagttaggctctgataactccgacgtgatgtctggaaatggcggt
atcagtggcaactatgcgccatacgaggaaaatgaagaagtcgaatacaacgatgaagaa
ttcggatcctacgaggaagaagaaagtgattacttttccgatggtgaagaagtggaagat
gatgatgactttgaggcgaaagctataaaattccgccagcagatggacaagttacattca
gaggctgcagcggaacaggagggagacatcaggtcccgaacagccaaaccaacactcttc
ggtgatgcagaggagcaagaagaggatggagagcaggtgcaactgctgggacagcagcac
actgtagaggagctaagagatcgcatcggtgaaactgtccatgtcctttcccattttaag
gaagagcgggaagaggggcgaacgcgggaagattatatgcagctgcttcgtgcagacatc
atggaactctacgggtataatgagtttcttacagattcaattcttctcctgttttcgccc
acagaggctgttgagttctttgaagcaatggaaaagccgcgaccaacaactattcgggtc
aacacaatcaaggccaaacgtcgtgacttggtgcaggcccttgtgaagcgtggaatgaac
gtagagccattggaaaagtggtccaaagtagggctccaggtgtttgagtctaatgttccc
atctccggcacagtcgaataccttgccgggcattacatgcttcagtctgcagtatcgttc
ctacctgtaatggcgctggcaccgcaaattaacgagcgcgtacttgatatggccgcggct
cctggcggaaaaacgacgtatattgcgcagttgatgaaaaataccggcgtcatttttgcc
aacgatgtcagtgagccccgtacaaaatccttgaatgcaaaccttcagcggctcggtgta
acaaacactgtggtgactaactacgacggagtcgggtttgagaaggtcatgaaaaacttc
gatcgtattttattggatgccccgtgtacaggcagtggaattatttcccgggacaaaagc
atcaaaacaagcaagcaatacgaagatgtgcagagagcctctcagttgcagcggtcactt
ctcctctcagcgatagacgcggtgcgggttggtgggtacattgtgtattcgacttgctcc
ttccttgtcgaggaaaatgaagcggttgtggacttcgtgctccaccggcgtgacgtggcc
attgtggaggcggggctgccatttggaaggccgggattgacgaagtaccgccaccacagg
ttccatgacaagctgcaaaacgcccggcggctcttccctcacgtgcacaatatggacggt
ttctttgtgtgcaagttgaagaaactttcaaataacccaggcggtccgagcacgaatggg
ctgaagaaggaggaatctaacgtcgcgaaaagtgggaatgtgaaaacaatgaagggaact
aacaagaggcaaagagaggatgacagcaaggcaaagggggaactaaagaccaagaacaat
cgtatcagtgtcccgccggccacgaagaagtctccaaagagtaaagggaaaagtggatga
DBGET
integrated database retrieval system
