Trypanosoma brucei gambiense: TbgDal_IX2790
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Entry
TbgDal_IX2790 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg04120
Ubiquitin mediated proteolysis
tbg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TbgDal_IX2790
04120 Ubiquitin mediated proteolysis
TbgDal_IX2790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tbg04121
]
TbgDal_IX2790
Enzymes [BR:
tbg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
TbgDal_IX2790
Ubiquitin system [BR:
tbg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
TbgDal_IX2790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4
zf-RING_5
FANCL_C
zf-ANAPC11
Deam_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
23860275
NCBI-ProteinID:
XP_011776474
UniProt:
C9ZXQ9
LinkDB
All DBs
Position
9:626761..628227
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AA seq
488 aa
AA seq
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MLSLYAYIFLSLVVTIGFVVDYATVYTDFFSLVVALTDSPIFRLLCVNSFIALSWVLWLV
ARFTFFGTLSRTESDAVRSVTPVYAMEFIVCPLYFGISTLSSAGVVSLVTVVVAVLHRLA
QERVSTLQVMEDRVLRTPMLVRLLIFLYLFSMIDLYVVFDMIGNTAESYGDQLSMQYCIA
LLYVQFLISILKSFTQLFFTVATKESTYNSLAFYMEMFFSLSNNVVFFISFLYICTSSYV
PFPLMRMFLQNMIMCGKNVRLVARYRKLTALLREIPNATEEILSRDPHCAICYDDMSADQ
TCKQLPCGHCYHEACLLHWFEKMSTCPYCRSDIAQRTSAMAAYAKRVRVPADATTTPSEQ
TGSDASATPSPEDDTTSMPMPSEEEMRRSYERYLAEMASRQQAQGAAISAEADASRLGEE
VSAASTDRLSVVEEINKSLTQSNAVRSVDVPAVSTKEAQRLAAYEEHAAAVRAAQEKLQQ
RLKSIDAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctttccctatatgcgtacattttcctaagtttggtggtgactataggcttcgtcgtc
gactatgccaccgtttacactgatttcttttcgttagttgttgcgctgacagactccccc
atattccgcctcttgtgcgtgaacagcttcatagcgttatcatgggtcctttggcttgtt
gcccgcttcaccttctttggcacgttgagccgcaccgaaagcgacgcggtgcggagtgtt
acgcctgtgtatgctatggaatttattgtttgccccctttacttcggtatctccacattg
agttccgcaggtgtggtttcacttgttactgtggttgttgcggttctccatcgacttgca
caggagcgcgtatcaacacttcaagtgatggaggatcgggtgttacgtacacctatgctt
gtccggctgctgattttcctgtaccttttctccatgatcgacctctatgttgtgtttgat
atgattgggaatacggcagagagctatggagatcaactgtctatgcagtattgcatagcc
ttattgtatgtacagttccttatatccattctcaagtcgtttacgcaactcttcttcacc
gtggccaccaaggagtcgacgtacaacagcctggccttctatatggagatgtttttttcc
ctctccaacaatgtggtgttcttcatttcatttctgtacatttgtacttcatcgtacgtt
ccctttccgcttatgcgcatgtttttacaaaacatgataatgtgcgggaagaacgttcgc
ctcgtcgcgcgatacaggaaacttacggctcttttgagagaaataccaaacgccaccgaa
gagattttgtcccgtgacccgcactgtgctatatgttacgatgatatgtcggctgatcaa
acatgcaagcaactcccatgtgggcactgttatcatgaggcgtgcttgctccactggttt
gaaaaaatgtcaacgtgcccctactgcagaagcgacatcgctcagcgaaccagtgctatg
gcggcgtatgcgaaaagggttcgggttccggcggatgccaccactacaccatcggagcag
acgggatctgatgcgtcagcaactccgtcccccgaggacgatacgacaagcatgccaatg
cctagcgaggaggaaatgcggaggtcatatgagcggtacctagcagaaatggcttcgcgg
cagcaggcgcagggggccgccatctcagctgaagccgatgcttcgcgcttgggggaggag
gtttctgcagcatcaaccgatcgcttgtcagtggttgaggagataaacaaaagtctcact
cagagtaacgctgtcaggtcagtggatgtcccagcagtgagtacgaaggaggcgcaacgt
ctagcagcttacgaggaacacgctgcggctgtaagggccgcgcaagagaaactacagcaa
cgtctgaaatccattgatgcctcctag
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