Trypanosoma brucei gambiense: TbgDal_IX5740
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Entry
TbgDal_IX5740 CDS
T06526
Name
(RefSeq) katanin, putative
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tbg04812
]
TbgDal_IX5740
Cytoskeleton proteins [BR:
tbg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
TbgDal_IX5740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Katanin_con80
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
eIF2A
Beta-prop_TEP1_C
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_IP5PC_F
Beta-prop_VPS8
NBCH_WD40
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
RMC1_N
WD40_2
Beta-prop_WDR35_TULP_N
PROPPIN
Beta-prop_NOL10_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
23860602
NCBI-ProteinID:
XP_011776764
UniProt:
C9ZYJ9
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Position
9:complement(1250689..1252305)
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AA seq
538 aa
AA seq
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MPVIDSMTLQLPCQVYHSRFSPDSANRLVGLGCRDGGVHVYPFEDYSRTVLLSAGCSPST
SIAFDPQQRRLVGGTDEGSLHLWDMTTEGVVRTFGDGHKSTVTGVDFHPHTDVIATCSRD
SVLRVWDTRKKSCVRSHMEAKAPLCATEFSPSGRWCVSGCADGVVRLYDLQSGKEMHEFR
AHSGPVTSICFHPKRYYLAVGSSDGSVSFWELEGFTKIFQSKCLDTPVDAVYLSGKRMLV
AASHILRVYDFDMMSDSFAPIIESQWNIIGDLNYSSNTDEALFVEFSGQTAVMGRVPLAD
GGLTIPPIEKTVKSQQRDPPSFNRGEENTKMSVPVLRAAHQRLHRSPSQVAAASHTGESG
ELQMDDLLASSVTTVSVLQQRLTHLRVLRALWVQDNQQALVYLKELYTTNSDYGVTADFL
GAMQHLRMKERITLSNLPDLLDVVMYALAGERENQLLAALKVLKSMSSKFRPKLDEARRQ
APSFRNGEKNSTSLTMEQYYELSAKFDAVASVVQKLGKRKGPVGEEVREVLNEIPLSS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgccagttatcgattcgatgacactccaacttccatgtcaggtgtaccactcgcgtttt
agccctgacagcgcgaaccggctggtgggactgggctgcagggacggtggggtgcatgtg
tatccttttgaggactattcccgaacggtacttttgagtgcaggctgctcaccttcaaca
tctattgccttcgatcctcagcaaaggcgcctggtaggtgggaccgatgagggcagcttg
cacttgtgggatatgactactgaaggggttgtgcgtacgttcggtgacggtcacaagtcg
acggtaacgggagtggattttcacccgcacacggatgtcatcgccacctgctcgcgagat
tccgttcttcgcgtttgggacacacgaaaaaagagttgtgttcggtcgcatatggaggca
aaagcgcctctctgtgccactgagttctccccaagtggtcgctggtgcgttagtggttgt
gctgacggtgtggttcgcctgtacgatctgcagtcaggaaaggagatgcacgagttccgt
gcgcattctggacccgttacatcaatttgttttcacccaaagagatactatttagccgtg
ggaagcagtgatggttcagtctctttctgggagttagaaggtttcactaaaatattccaa
agcaagtgccttgacacgcctgttgatgcggtgtatctgtcaggaaagaggatgcttgtc
gcggcgtctcacattcttcgagtgtatgacttcgacatgatgagtgatagcttcgcccca
ataattgaatcgcagtggaacataatcggtgacctgaactattcttcgaatacggatgag
gcactgtttgtggagtttagtggacaaacagcggtcatgggccgtgtacctctcgctgac
ggcggactcaccatccccccaatagagaagacggtaaaatcgcaacagagggatcctcct
tcctttaataggggggaagagaatactaaaatgtctgtacctgttcttcgcgccgcacat
caacggctgcaccgctcgccttcacaagtggccgcggcatcccacaccggtgagtcgggc
gaactacaaatggatgatttattggcttcaagcgttacgacagtgtctgtgctgcagcag
cgacttacacatctgcgggtccttcgtgcgctttgggtacaagataatcagcaagcactg
gtgtatcttaaggagttatacaccacgaattcagactacggagttactgcggacttcctc
ggtgccatgcaacatttgcggatgaaagagcgcattactttaagtaatcttcctgatttg
cttgatgttgtaatgtatgcactggccggtgaacgagagaatcagttgctggcggccctc
aaagtactcaaaagtatgagcagtaaattccgccccaagttagatgaggcacgtcgtcaa
gccccatcatttcgcaatggagaaaaaaattcaacgagcctgacaatggagcagtattac
gaactcagtgccaagtttgacgccgttgcctcggtagtacaaaaactggggaagaggaag
ggccccgtcggtgaagaggtgcgtgaagtattaaatgaaataccactttcttcgtga
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