KEGG   Trypanosoma brucei gambiense: TbgDal_IX5740
Entry
TbgDal_IX5740     CDS       T06526                                 
Name
(RefSeq) katanin, putative
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tbg  Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tbg04812]
    TbgDal_IX5740
Cytoskeleton proteins [BR:tbg04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     TbgDal_IX5740
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR90_POC16_2nd WD40_WDHD1_1st Beta-prop_EML_2 Katanin_con80 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT122_1st eIF2A Beta-prop_TEP1_C Beta-prop_LRRK2 PEP5_VPS11_N Beta-prop_IP5PC_F Beta-prop_VPS8 NBCH_WD40 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_SPT8 RMC1_N WD40_2 Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_NOL10_N WD40_RFWD3
Other DBs
NCBI-GeneID: 23860602
NCBI-ProteinID: XP_011776764
UniProt: C9ZYJ9
LinkDB
Position
9:complement(1250689..1252305)
AA seq 538 aa
MPVIDSMTLQLPCQVYHSRFSPDSANRLVGLGCRDGGVHVYPFEDYSRTVLLSAGCSPST
SIAFDPQQRRLVGGTDEGSLHLWDMTTEGVVRTFGDGHKSTVTGVDFHPHTDVIATCSRD
SVLRVWDTRKKSCVRSHMEAKAPLCATEFSPSGRWCVSGCADGVVRLYDLQSGKEMHEFR
AHSGPVTSICFHPKRYYLAVGSSDGSVSFWELEGFTKIFQSKCLDTPVDAVYLSGKRMLV
AASHILRVYDFDMMSDSFAPIIESQWNIIGDLNYSSNTDEALFVEFSGQTAVMGRVPLAD
GGLTIPPIEKTVKSQQRDPPSFNRGEENTKMSVPVLRAAHQRLHRSPSQVAAASHTGESG
ELQMDDLLASSVTTVSVLQQRLTHLRVLRALWVQDNQQALVYLKELYTTNSDYGVTADFL
GAMQHLRMKERITLSNLPDLLDVVMYALAGERENQLLAALKVLKSMSSKFRPKLDEARRQ
APSFRNGEKNSTSLTMEQYYELSAKFDAVASVVQKLGKRKGPVGEEVREVLNEIPLSS
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgccagttatcgattcgatgacactccaacttccatgtcaggtgtaccactcgcgtttt
agccctgacagcgcgaaccggctggtgggactgggctgcagggacggtggggtgcatgtg
tatccttttgaggactattcccgaacggtacttttgagtgcaggctgctcaccttcaaca
tctattgccttcgatcctcagcaaaggcgcctggtaggtgggaccgatgagggcagcttg
cacttgtgggatatgactactgaaggggttgtgcgtacgttcggtgacggtcacaagtcg
acggtaacgggagtggattttcacccgcacacggatgtcatcgccacctgctcgcgagat
tccgttcttcgcgtttgggacacacgaaaaaagagttgtgttcggtcgcatatggaggca
aaagcgcctctctgtgccactgagttctccccaagtggtcgctggtgcgttagtggttgt
gctgacggtgtggttcgcctgtacgatctgcagtcaggaaaggagatgcacgagttccgt
gcgcattctggacccgttacatcaatttgttttcacccaaagagatactatttagccgtg
ggaagcagtgatggttcagtctctttctgggagttagaaggtttcactaaaatattccaa
agcaagtgccttgacacgcctgttgatgcggtgtatctgtcaggaaagaggatgcttgtc
gcggcgtctcacattcttcgagtgtatgacttcgacatgatgagtgatagcttcgcccca
ataattgaatcgcagtggaacataatcggtgacctgaactattcttcgaatacggatgag
gcactgtttgtggagtttagtggacaaacagcggtcatgggccgtgtacctctcgctgac
ggcggactcaccatccccccaatagagaagacggtaaaatcgcaacagagggatcctcct
tcctttaataggggggaagagaatactaaaatgtctgtacctgttcttcgcgccgcacat
caacggctgcaccgctcgccttcacaagtggccgcggcatcccacaccggtgagtcgggc
gaactacaaatggatgatttattggcttcaagcgttacgacagtgtctgtgctgcagcag
cgacttacacatctgcgggtccttcgtgcgctttgggtacaagataatcagcaagcactg
gtgtatcttaaggagttatacaccacgaattcagactacggagttactgcggacttcctc
ggtgccatgcaacatttgcggatgaaagagcgcattactttaagtaatcttcctgatttg
cttgatgttgtaatgtatgcactggccggtgaacgagagaatcagttgctggcggccctc
aaagtactcaaaagtatgagcagtaaattccgccccaagttagatgaggcacgtcgtcaa
gccccatcatttcgcaatggagaaaaaaattcaacgagcctgacaatggagcagtattac
gaactcagtgccaagtttgacgccgttgcctcggtagtacaaaaactggggaagaggaag
ggccccgtcggtgaagaggtgcgtgaagtattaaatgaaataccactttcttcgtga

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