Trypanosoma brucei gambiense: TbgDal_IX7480
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Entry
TbgDal_IX7480 CDS
T06526
Name
(RefSeq) replication factor C, subunit 3, putative
KO
K10756
replication factor C subunit 3/5
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03030
DNA replication
tbg03410
Base excision repair
tbg03420
Nucleotide excision repair
tbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TbgDal_IX7480
03410 Base excision repair
TbgDal_IX7480
03420 Nucleotide excision repair
TbgDal_IX7480
03430 Mismatch repair
TbgDal_IX7480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_IX7480
03036 Chromosome and associated proteins [BR:
tbg03036
]
TbgDal_IX7480
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_IX7480
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TbgDal_IX7480
DNA Replication Termination Factors
ELG1-RFC complex
TbgDal_IX7480
Chromosome and associated proteins [BR:
tbg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TbgDal_IX7480
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TbgDal_IX7480
Check point factors
HRAD17(Rad24)-RFC complex
TbgDal_IX7480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_30
AAA_5
AAA_22
AAA_19
AAA_14
AAA_24
DEAD
AAA_16
DUF815
AAA_11
RuvB_N
Mg_chelatase
NPHP3_N
AAA_7
ATPase_2
AAA_2
TniB
SLFN-g3_helicase
AAA_3
AAA_28
RCF1-5-like_lid
AAA_assoc_2
ABC_tran
nSTAND3
NB-ARC
bpMoxR
RNA_helicase
AAA_23
T2SSE
AAA_29
AAA_33
AAA_18
Sigma54_activat
AAA_25
Motif
Other DBs
NCBI-GeneID:
23860795
NCBI-ProteinID:
XP_011776938
UniProt:
C9ZZ23
LinkDB
All DBs
Position
9:1581438..1582511
Genome browser
AA seq
357 aa
AA seq
DB search
MTGEGTLSNGQPAKNSTLPWVEKYRPTTLDDVVAHEEILDTTRRLMNSGSMPHLLFYGPP
GTGKTTTIKACAHHLFGKERLRANVLEMNASDDRGIDVVRQQVREFASTSSIFFQNNPGN
QTVTNFKLVILDEADQMSSDAQAALRRIIEKFTKNVRFCILCNHINKIIPALQSRCTRFR
FSPVKKSAMLPRLKLIAREEGVPFTDEGLISAFRLSDGDMRRCLNTMQASSMSAGEITEE
SVYRTTGNPTPTDVRVMVGDMLSHNYATSWEKVQQLVVDKGVSTADLVREVHLIVMAMDL
PQDCKCFLLIKLADVEYYAAGGTREMINIGGVLGAFQLVKEALTQNKPIFELAGGLC
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacgggagaaggcacactgtcgaatgggcaacctgcgaagaatagtacacttccatgg
gtggagaagtaccgccccactacacttgatgatgtggtggcacatgaagaaatccttgac
accacgcgtcgcttgatgaacagtggtagcatgccacatcttcttttttatggcccacca
ggaaccggcaaaacaacaaccattaaagcttgcgctcatcacctatttggaaaagagcgt
ctgcgggccaacgtactcgagatgaacgcgtcagatgatcgcggtattgatgttgtgcgt
cagcaggttagggagtttgcgagcacaagctccatattttttcaaaacaaccccggaaac
caaacggtaacgaatttcaaactcgttattcttgatgaggctgaccagatgtccagtgat
gcgcaggccgccttacgccgcatcattgaaaaatttacgaaaaacgtacgattctgcata
ttgtgcaatcacatcaacaaaatcataccagccctacagtcgcggtgcacgcggtttcgc
ttctctcctgtgaaaaaatcagcgatgcttccccgcctgaagttaattgccagggaagaa
ggtgttcccttcactgacgagggtttgatatctgcatttcgacttagtgatggcgatatg
cggcgttgtttgaatactatgcaggcctcctctatgtcagcaggggaaattacagaagag
tctgtgtatcgcacaactggcaacccaacacctacggatgtgcgagtaatggtgggagac
atgctgtcacataattacgccacatcatgggagaaggtgcagcagctggtagtggacaag
ggcgtgtcaacggcagatctggtgagggaagtgcaccttatcgtgatggcgatggatctc
ccacaagactgtaaatgttttcttttgataaaactggcggatgtggaatactacgcagca
ggtggtacccgggagatgatcaacattggtggggtgcttggtgcgtttcaattggtgaag
gaagcacttacccaaaataaacctatctttgagctcgcaggtggcctgtgctga
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