Trypanosoma brucei gambiense: TbgDal_IX8350
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Entry
TbgDal_IX8350 CDS
T06526
Name
(RefSeq) ubiquitin-protein ligase, putative
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TbgDal_IX8350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tbg04121
]
TbgDal_IX8350
Enzymes [BR:
tbg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
TbgDal_IX8350
Ubiquitin system [BR:
tbg04121
]
Ubiquitin ligases (E3)
HECT type E3
TbgDal_IX8350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
C1_2
WAPL
Motif
Other DBs
NCBI-GeneID:
23860892
NCBI-ProteinID:
XP_011777025
UniProt:
C9ZZB0
LinkDB
All DBs
Position
9:complement(1772483..1778221)
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AA seq
1912 aa
AA seq
DB search
MSRQLVVDSKQQIKAVQHLSKDPERVVGALEDMCMSLVMGVEVYLRGFDSMRVVPTLVHM
AESERFFRAGDALTMIFRALSLIMEHVPTSYCGVHPYHKRLVRIATEVLARVHSREMRFS
NLDRVMLMEEVLRLIRFVTLDESSVSLVHLGLRDVTKTAQYENALLTRQALDVLLAVCSK
VVLPSETRKRKFFSSVVSLFSCCKSLKDEQQENKPCVKPSVVTTDHILVPFLQGMIQQYA
SSLESSPDSWSLLELALQCLGMLIRRAVLFNRLSSAQRMITSELCRCLYRLLLLNDGNVA
LDPSVRSERLLFSETMIDIILTADWVNVSDMLLSKEARAFYGIVLDDSDPSITMLLSDPF
PVGGISRAAHRRDKNHIVSIAAIRHFILASPPLPSEAFGPKPKVVLPVHKWMWEDEMRHN
SPIPEEACVTLETCLARRTKEVTLRIHSKILTANLATMKICSGFGGAELNISRKFVPFVF
HVMNEADIRSVKAAKDVTGVVEYIANSAEENIGVPISSGMDKLVNRRESELCRYYVLNNS
APVPAASMKIAEMYLESLCKYATWASGSMAMQLGVCACAALLQAAILAKKPQQLTELLRK
TMRPLCDMLRTALISADKATKSVALTMMVWLLRHPGSSEWKAAETAYRCGLVKQLENLAN
SKCKRLDDRQADDHDGKIRRMVPKVKLEGPENRTMHLMAMVRAILSTVEKEMSENSVPPS
ARSHVGCVTALWESVQELRKQTMVFGTHQKVVAQVLRVMEKTSGNITAFEISKMGIADAV
LGYLLMSNTGGGEYDTNEEIGATCAAESSGALVSEGVVPGLTVDTGTDPATFGGVRIADQ
LKRLCQKDRLKCFLQLMAEYPRGVEALIENLVSALCLISNLPFVESLMTSQRVTCVPLTK
AMSAVSQLSQDVSLCRKTVYPSSSGNPCRRGVSHDRGRNQPCSSLKSGDIPSSTPSQRAV
SQRGSKLTVRESCPNGHLLLSLEVIAPKRSCESCEEQLETGFGCNVCNYFLCVSCHSHFI
TSRDGGATGRRSSSFNGVAAGAPDTVVQPKSRVNVAISAHLFSSIGDIERTFRTDSNSTK
GTEVAPCPQSTLAAEVFLERVQLVLSRKKETMSYVELRQELQRLIDGFIAQRETIESLDE
LDAHNKKTPVDLEEPSRLERMLHDAMEDRYVLYTSPTGRCAYQETLMGNIMQRALNLGLV
DVVGQLESCLVTPESHGEPLNLGGGEKGLSKTLLLLRGDIVNGEVPPSATEDKEHITSWQ
LNRFHHFESDAHTHCCCGLRSREELNTAYPSKLVRKPSHLSQSPDVLLLILLHKILQPLM
VANTIPINPDVFVSAILTTQLVKSVAASALRIALLPPRIAVPRWVDFILTEAKFLVPPSV
REDVVRFLAYGARRALHANIRSSMGSRRYRMYKVYPSEWSKYENHKYVVSRNDLLHGAYM
VLRKGAECRAPISIQFKGEVGIGQGPTAHFYTLIARELTKCRLRLWNNSSRSSTTHESGD
SCGNRQLRSKSNSRTFDDEQRVESRPEGLFPCSSVPKVLQRFSTDLSLSSCRDTKALTER
FLCMNDFFEVDEERAQLYYLVGTVLGRAFTDAVVFPLDISPALALFLCRGIPPSRIVLRC
TEKEEQPWEPERPIDFMSLGIEEVEMMDKQVASSLRSLLSMSSKELSSLDLPFTMPGDDR
FEMIDKGQSTCVNLTNVSAYIRRAASALLYESVVMPIRFITYGFRDVVPCEALAALDASE
AMSLLCGNRIRDSEPLWTAAEIKSIIVPDHGYNSESPQITMLQNILAKRFGPREQRAFLL
FCTGCPRLPHGGISALGAITVVQSTHMPTLPDASHTEGNGKDGSNGGRKGGDRSRRISRT
GNGTKAVGIDWPLPSVNTCFRYLKMPPYPTEELMYNKLQLSIMYAGDTFELS
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacagctagtggtggactccaagcagcaaattaaggcggttcaacatctgagc
aaagaccctgagagagtggttggtgcactggaggacatgtgcatgtctctcgtaatgggt
gtagaggtttatttacgtggatttgattcaatgagggtggtgccgactttagtacacatg
gcggagagtgagcgcttttttagggctggcgatgccttgacgatgatctttcgcgcactt
tcactcataatggaacatgtccccacttcgtattgtggagtgcatccataccacaagcgc
cttgtacgtatagcaacggaagttcttgcacgtgttcatagtcgggagatgcgcttcagc
aacttggatcgcgtcatgctgatggaggaggtcctccggcttattcggttcgtcacgctg
gatgaaagtagcgtttccttagtacaccttggcttaagagatgtcaccaagactgcacag
tatgagaacgccctacttacgcgacaggctctcgacgttctcttagccgtttgctccaag
gttgtactaccgtcagaaacgaggaagaggaaattcttcagcagtgtagtatccttattc
tcctgctgcaagtcccttaaagatgaacaacaggaaaataaaccttgcgtcaagccatct
gtagtaactacggaccacattcttgtgccgttcttgcaaggtatgattcagcagtatgcg
tcaagtcttgaatcatcgccagactcatggtcgttgttggagttggcattgcagtgtctc
ggcatgctcatacgacgggctgtgctcttcaaccgcctttcatctgcgcagagaatgata
acatcggagctctgccgatgtctttaccgacttcttttgttaaacgatggtaacgtcgca
cttgacccttccgtgcgctctgagcgtcttctcttctcggaaacgatgatagacattatc
cttacggcagattgggttaatgtgagtgatatgcttctttccaaggaagcgcgggctttt
tatggaattgtactcgatgactcagacccgagcattacaatgcttctgtccgaccctttt
cctgttggtggcatatcacgggccgcacatcggcgcgataaaaatcatattgtttccatt
gctgccatacgtcactttattttggcatcccccccacttcccagtgaggcttttgggcca
aagcccaaagtagttcttcctgtgcacaaatggatgtgggaagatgaaatgcggcataac
agtcccataccggaggaggcttgtgtgacgctggaaacttgcttggctcgtcgtacaaaa
gaggtgacgcttaggatacactcaaagatactaactgcgaatcttgcaacaatgaagatc
tgcagcggatttggaggtgctgagctcaatatttcacgcaaattcgtcccctttgtcttt
catgtgatgaatgaagcagatatacgatctgtgaaagcagcgaaggatgtcacgggtgtt
gttgaatacatagcaaactctgcagaagaaaatataggagtgccaatttcttctggtatg
gacaaactagtaaacaggcgtgagtcggagttgtgtcgttactatgttctcaacaacagc
gcgccagttccagccgcatccatgaagatcgcggagatgtatcttgagagtctatgcaaa
tatgcaacctgggcgtcgggatcaatggctatgcaactgggcgtgtgtgcctgcgcggct
ctgcttcaggcagcgatattggccaagaaaccccagcaacttacggaactgttgcgcaag
acaatgcgtccgttgtgtgacatgcttcgcaccgcactcatttcggctgacaaggcaacg
aaatccgtggctctcacgatgatggtgtggcttcttcgccacccagggtcatcagagtgg
aaagcggcagagacggcttatagatgcggcttagtgaagcagttggaaaatttggccaat
tcgaaatgcaaaaggctggatgatcgacaggcagatgatcatgatggtaaaattcgtcgg
atggtaccaaaagtcaagctggagggacccgagaaccgaacgatgcacttaatggcgatg
gttcgtgcgatactgtcaactgtggagaaagagatgagtgaaaactcagttcccccttcg
gcccggtctcatgtaggttgtgttacagccctttgggagtcagtgcaagaactgagaaag
caaactatggtatttggaacgcaccagaaggtagtggcacaagtgctgagggttatggag
aaaacgtcgggaaatataacagcatttgagatatctaaaatgggtattgcggatgcggtg
ttgggctatctattaatgtcgaacactggaggaggcgagtatgatacaaatgaggaaata
ggggcgacttgcgctgctgaatcttccggtgcgttggtaagtgagggagttgtcccgggc
cttacggttgacacaggaaccgacccagcaacttttgggggtgtgcgtatcgctgatcaa
cttaaacggctctgccagaaagatcgtctcaaatgtttcttacaattaatggccgagtat
ccacgtggtgtggaggcgttaatcgaaaatttagtttctgccctttgtcttatcagcaac
ttgccctttgttgaatcgctgatgacatcgcagcgtgtgacttgtgtgccgctgaccaaa
gccatgagtgcagtttcgcagctatcgcaggatgtatctctgtgtcgcaagacagtttac
ccatccagttcgggaaatccttgccgccgtggtgttagccacgatcggggaaggaatcaa
ccctgcagcagcctcaaatccggggatattcctagttccacgccctcccaacgtgcagtg
tcgcagcgcggttcgaaactaacggtacgtgagtcttgtccaaatggtcatttgttgctt
tcactggaggtgatcgcaccgaaacgttcctgcgagtcatgtgaagagcaactggagacg
gggttcggttgtaatgtgtgtaactattttctctgtgttagttgccatagccattttatc
acttcgcgtgatggcggtgctacgggtcgtcgctcctcatcttttaatggtgttgcagcg
ggggcccctgacacagtagtacagccaaagtcacgtgtgaacgttgctattagtgcacat
ttgttttccagcattggggatattgagcggacattccgcacagactctaactccaccaag
ggtaccgaagttgctccttgtccgcaatcgactctcgctgctgaggtgtttctggaacga
gtgcaactggttttgtcgcgaaaaaaggaaacgatgagttatgttgagctccggcaggag
ttgcagcgactgatcgacggcttcatcgcgcagcgggagacgatcgaatctctagacgaa
cttgatgcccacaacaaaaaaacgcctgtggacctggaggaaccaagcaggttggagcgt
atgttgcacgatgccatggaagatcggtatgttttgtatacgtcacccacgggacgttgt
gcttatcaggaaactctcatgggaaacataatgcagcgggcgttgaatttgggtctagtg
gatgttgtgggtcagctggagagctgtcttgtgaccccagagagtcacggagaacctttg
aacttgggtggtggagaaaagggcttatccaaaacactccttctgttgcgtggggacatt
gtgaatggggaagtaccgccgtcagcaactgaggacaaggagcatataacgagctggcag
ctgaaccgatttcatcattttgaaagcgacgctcacacacactgctgttgtggcctgcgg
tcgagggaagagctgaacactgcctacccgtcgaaattggtgcgtaagccgtcacatctt
tcgcagagtccggatgttcttcttctcatccttcttcacaaaatacttcaaccattaatg
gtggcgaatacgatccctatcaaccccgacgtttttgtaagcgccattctgacaactcag
cttgttaaatccgtagcggcatcggcgcttcgtatagcgcttctgccaccacgtatcgct
gttccacgctgggttgacttcattttgacggaggcaaagtttcttgttcccccatccgtt
cgggaggatgtcgtacgttttcttgcgtatggtgctcgccgcgcgcttcatgcgaatata
agaagctcaatggggagtcggaggtatcgtatgtacaaggtgtatccgtcagagtggtcc
aagtatgaaaaccacaagtatgttgtcagtcgcaatgatttgcttcatggagcctacatg
gttctcagaaaaggggcggaatgccgtgcgcctatatcgattcagttcaagggtgaggtc
gggataggccagggaccgacggcacacttctacaccctcattgcaagggagctcaccaag
tgtcggctgcggctatggaataactcttcacgctcatcaacaacacatgaaagtggtgac
agttgtggaaaccggcaattaaggtcgaagagtaacagcaggacatttgacgatgagcag
agggtggagtcccgccctgagggactttttccgtgtagctccgtccccaaagtactgcaa
cgtttttcaacagatctatcgctgtcttcctgtcgtgacactaaagcgttgacggaaagg
tttctctgtatgaatgattttttcgaggtggatgaagagcgcgcccagttgtattatctc
gttggcaccgtactgggtcgggcattcaccgatgcagttgtctttcctttggatatcagt
cctgcattggcgctgtttctttgccgtggaattccaccatcacgtatagtgcttcgctgc
acggaaaaggaggagcagccgtgggagccggagcgacccatcgacttcatgtcacttggc
atcgaagaagtggagatgatggataagcaagtggcttccagcttacgttcattgctttca
atgagttcgaaagagttatcatcccttgatttacccttcacaatgcccggtgacgataga
ttcgagatgatagacaagggacagagcacatgcgtaaacttgacgaatgtatccgcttac
attagacgagctgccagcgctctcttgtatgagtcagtcgttatgcccatccgcttcatt
acatatggtttccgtgatgtggtcccttgcgaggcgctagcagcacttgatgccagcgag
gcgatgtcgttgttgtgtggcaatcgcatcagggattccgaacccctctggacagctgca
gagatcaaatccatcatcgtccccgatcatggttataacagcgagtccccacagataaca
atgctgcagaatattctcgcgaagcgctttggcccccgtgagcaacgagcatttcttctc
ttctgtacgggctgcccgcgccttccgcatggcggcatcagtgcacttggtgccattaca
gttgtgcaaagtacccatatgccgacattacctgatgcctcccatacggaaggcaatggc
aaagacggttctaacggcgggcgaaaaggcggtgatcggtcacggcggatctcacggacg
ggcaacggaactaaagctgtgggaatagattggccccttccatccgtcaatacgtgtttc
cgctatttgaagatgccaccgtacccaacagaagaactaatgtataataaacttcaactc
agcatcatgtacgcaggggatacattcgagctgtcgtag
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