Trypanosoma brucei gambiense: TbgDal_IX9020
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Entry
TbgDal_IX9020 CDS
T06526
Name
(RefSeq) mismatch repair protein PMS1, putative
KO
K10858
DNA mismatch repair protein PMS2
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03430
Mismatch repair
tbg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TbgDal_IX9020
03460 Fanconi anemia pathway
TbgDal_IX9020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_IX9020
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
TbgDal_IX9020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
23860967
NCBI-ProteinID:
XP_011777092
UniProt:
C9ZZH7
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Position
9:complement(1907293..1909659)
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AA seq
788 aa
AA seq
DB search
MITLLDEGSSRKLSAGQVITNLSSVVKELVENSLDAGARTVAIRVEDSGAGNITVEDDGS
GMDLSYLLDSEGRLKEDASLPLLASRATTKRRGGDSGLSSQAAQTLGFRGEALHSLAHLS
ELSICTMSESTRPTALLIAYDSNSRRTTVKVTSERRDVGTTVVVSKLFAALPVRHKDFVR
GRKKQLLAATLLMKQYALSHPHVRLLMTHRAGPDSAPVTLVSLTGTGDPQRALAEAYGGR
VIANMERVEWELTFGTITGYVSKGNAGRLSSDMQVFALDGRLVDLPMMAKAVNDAYAESL
PNAAQRTFPAFFLHVSSGESLPYDVNLVPDKRKVLISDEERHAGEVRTWGLRTFQASTDG
IDLPVRNEGGWRHVPERRNTQETMPTQTPLSATSIAQFIYQRRETSQGDNLIDNAAVAQV
QPSVCLSQLLSGSSPIGRTSSPDATASPTSTANRAPSERSAGSVESVLEYPLTFEPTQKR
QRLESSAEEGNTGDTDDSSWGEEDPRELGPEEMMGTDDAVVNYVTDDTNQQRPGPPRSSV
RFPPFSVLAEMPLVHSLGEWAAPSQPSDGGGVRKFSRLQKQTEEELTLYLGKESFKNMVV
HGQFNHGFIVTSLDDNIFVIDQHAADEKGNYEHLMSHYVARPQPLFSPVPVSMEPQAVDL
AVDHAEELRQHGFIVQRSDDTNKLLVLSVPVIPYEVVDPQNVVELIRQLVHYNTISKPMR
CVWHSMATKACRSSIMVGTMLSEKKMRSVVDRMGELEQPWNCPHGRPTVRHVSKISSLVS
LMTKSRRA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgattacccttttggacgagggaagttcgcgcaagttgagtgcagggcaggtaattacg
aatctttccagcgtcgtgaaagagttggtagagaatagcctagatgccggtgcccgtacc
gttgcaatacgtgtggaggatagcggcgctggaaatattaccgtggaagatgatggaagt
ggcatggacttatcttatctgctagacagcgagggccgactgaaagaggatgcttccctg
cccctgctagcctcgagggcgacaacaaaacgaagggggggcgacagtggtctttcgtcg
caggcggcgcaaacactgggttttcgtggcgaagcgctccactctttggctcaccttagc
gagttgtccatatgcacaatgtcagaatcaacccgacctactgcactactgatcgcgtac
gacagtaattcccgccgtacgactgtaaaggtaacgagtgaacggagggacgtaggcaca
accgttgtcgttagcaaactctttgcggctcttccggtgcgtcacaaggatttcgtacgg
ggtaggaagaagcagcttctcgccgctaccctactgatgaagcagtacgccctttcacac
ccccacgtacgcttgttgatgacccatcgtgcgggacctgacagtgcccccgttactctg
gtgtcgttgacggggacgggcgacccccagcgagcccttgctgaggcgtacggtggacgt
gttatcgccaacatggagcgtgtggagtgggaactgacttttgggacaattacgggttat
gtttcgaaggggaatgccggcagactttcctccgatatgcaagtgtttgcactggatggg
aggcttgttgacctccccatgatggccaaggcggttaacgatgcctacgccgaatccctg
ccaaacgccgcgcagcgcacatttcctgccttcttcctgcatgtcagctctggtgagtca
cttccctacgatgtgaatttagttcctgacaaacgcaaagttctcatttcggatgaggag
agacatgctggggaggttcgtacatggggtcttcgaacgttccaggcatcaactgacgga
atagatctgcccgtgcgcaacgaaggcggatggagacacgtaccggagcgcaggaacaca
caggagacaatgcctactcaaacgcctctttctgctacatctattgcacagttcatctat
cagcggcgggaaacatcgcagggagacaaccttattgacaatgctgcggtggcgcaggtg
cagccctccgtttgcttaagtcaactgttgtctggaagctcgcctattggacggacatcc
tcccctgatgctaccgcttccccaaccagcaccgccaaccgcgcaccatcggagcgttct
gcaggttctgttgaatcagtcttggagtatcccttgacctttgagccaacccagaagagg
cagcggttggagtcctcagcggaagaaggaaataccggtgacactgatgatagcagctgg
ggtgaagaagatccccgggagctcggaccggaagagatgatggggactgatgatgcagtt
gtgaattacgttaccgacgatacgaatcaacagcgacccggtccccctcgctcttctgtg
aggtttcctccattttcagttttggctgagatgccactggttcactcccttggagaatgg
gcggctccgtcccaaccttccgatgggggaggtgttcgaaagttttcgaggcttcagaaa
caaaccgaggaggagctcacgttgtatttggggaaggagtcgttcaaaaatatggttgta
catggtcagttcaaccatggcttcattgtaacttcactggacgacaacatctttgtgatc
gaccagcacgctgccgatgagaaaggcaactatgaacatctaatgagtcattatgtagcc
aggccacaacccctcttttctccagtacctgtgtcgatggagccccaggctgtggatttg
gctgttgatcatgctgaagaactgcggcaacacggcttcatcgtgcagcggagtgacgac
accaataagttgctggtgctatcagtgcctgtgattccttacgaggttgtggacccgcag
aacgtcgtagagctgattaggcagttagtgcattacaatacgatcagtaaaccgatgcga
tgtgtgtggcactcaatggcaactaaggcatgccgttctagcattatggttggaacgatg
cttagtgagaagaaaatgcggtcagtcgtggaccgaatgggtgagctggaacagccgtgg
aactgtccacacgggcggccgaccgtgcggcacgtctccaagatttcttcgttggtttcc
ttaatgacgaagtcccgccgtgcgtga
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