Trypanosoma brucei gambiense: TbgDal_V3920
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Entry
TbgDal_V3920 CDS
T06526
Name
(RefSeq) mitochondrial DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TbgDal_V3920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_V3920
Enzymes [BR:
tbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TbgDal_V3920
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
TbgDal_V3920
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
TbgDal_V3920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
HHH_5
IMS_HHH
FlgN
Motif
Other DBs
NCBI-GeneID:
23861395
NCBI-ProteinID:
XP_011773541
UniProt:
C9ZPC6
LinkDB
All DBs
Position
5:complement(825294..826517)
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AA seq
407 aa
AA seq
DB search
MLRRTFFRLSLDNRENIIRIFTEMADLNNALGEKYKVQSYNRAVRSLKTHLDLPLRTVED
LEKFPGIGSKLLKKAEEIIRTGKLDELEKKTKPKLKAIQELTQIHGFGPRAAATLFDREG
IFTVEDLIEKADQIQLTEQQRVGVRYFHDINEKIPMHESILHENFLRECALRRLGSDYEI
QICGSYRRRHPFSGDIDAILARSLNAPPLDAPVTTTGVLTILVEYLQEQRYLEATMALGP
LKYMGMGRLPPRTTGGATKTYKARRVDIRLIETKSVPTALLTFTGSKNFNVIMRQAAISK
GYLLNEYGLFKVGTSDEVRVLQERVRARKAAGLSKSQMKQEDPYSSSSVTEEGAEPFVSS
ISGNSAKMETLGMTKEELEAKRVHVTCEKDVFDVLGMPYAKPENRDP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctcagacgaaccttcttccgtctgagtcttgacaaccgtgagaacatcatccgcatt
ttcacggagatggcagatctcaacaatgccctgggtgagaaatacaaggtacaaagttat
aaccgcgcggtgcggagcctaaaaacgcaccttgacttaccactgcgcaccgtcgaggac
cttgaaaaattccctggaatcggcagcaagctgctgaagaaggctgaagagatcatccga
accgggaagctggatgaacttgagaaaaaaacgaagcccaaactgaaggcaattcaggaa
cttacgcagatccatggctttggcccccgggcggcggcaacactgtttgaccgcgaaggt
atctttactgtggaggatcttattgaaaaggcagaccagattcaactgacagagcaacag
cgcgttggtgtacgttacttccacgacataaatgagaaaatcccgatgcacgaatccatc
cttcacgaaaacttcctccgggagtgtgcgttgcggcgactgggctctgattatgagatt
cagatatgcggtagctaccgccgccgtcatcccttcagcggcgatattgacgccatactt
gcgcgttctcttaacgccccaccattagatgccccggtgacaaccactggcgtccttacc
attctggttgagtaccttcaggagcagcggtacctcgaggcgacgatggcactcggacct
ctcaaatacatgggcatgggccggctcccaccgcgcacgacgggaggtgcaacaaaaaca
tataaggctcgtcgtgtggatattcgtctcattgaaacgaagtctgttcctaccgccctc
ctcaccttcacggggagcaaaaacttcaacgtcattatgcggcaagcggccatcagcaaa
ggttacctgctgaacgagtatggcctctttaaggtgggcacgtcggatgaggttcgagtg
ctgcaggagcgagtgcgagcaaggaaagccgcaggtttaagcaagtcacagatgaagcag
gaggacccgtactcttcgtcctctgtgactgaagagggtgcagagccttttgtctcgtct
attagtggaaactctgcgaagatggaaacgctgggtatgacaaaggaggaactcgaggcg
aagcgggtgcacgtgacgtgtgagaaagacgtgtttgatgtcctcgggatgccttacgca
aaaccggagaatcgggacccatag
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