Trypanosoma brucei gambiense: TbgDal_V3960
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Entry
TbgDal_V3960 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbg03016
]
TbgDal_V3960
Enzymes [BR:
tbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
TbgDal_V3960
Transfer RNA biogenesis [BR:
tbg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
TbgDal_V3960
Prokaryotic type
TbgDal_V3960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
23861399
NCBI-ProteinID:
XP_011773545
UniProt:
C9ZPD0
LinkDB
All DBs
Position
5:complement(831362..834616)
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AA seq
1084 aa
AA seq
DB search
MSVDTIQLVGTDVPNSYGSCCFTGHVQHEVLNWVTEPMPPIGSASQSPTPASRCESQLLF
FNCPEGTQRFSAEAAIRLVRTRGFFFTRWVPSTVMGMPGLLFTINDAGVHHANFFGPGGM
GMTGGSDEVQGVGDSAAAAQSSSCGSDVIGNCTGGLAEMLDALRRHYFVYRQMSFQQLRV
GQLPRRLSTSMPGNYVYEVPLLFDRSETISTVGQGRGHRVPEAAALSLSSFFVIALQLST
TSALVGFRISQGNKSDADEVYGYAILHAPAAVFDCRCAKALGVPAGPLYGQLKQGVGVWV
DDPPTPGAEGECNTRRFIDPRSVQQATVGSQSLYVTLVLDGDSVCDVATAMETLFGRDGA
GAEERDFRQEHSTVDGGDCSTSGKLYELLKQWKPQFAYRSHSANLCKDDGTAQVERTISL
VHVVHVQCLQFFSSIGGGNHVIGQSLYISNVFAHVFPPVRQDAMKCLSNDANFPVGLEPP
TAGGTKHHFCADVQSTFSAFPTALAHRYHLNSIAAQQFPLASSLSEKSDSEPSECWIRHC
YVDDGKGPVWPYAVKHLLIPPGASTPLVTEISDDPSAAHVLVERLAGATLSARSGLENFD
KQNVAGREKKGTNVKGLLRYPTATSAAAMLSEQFRSAVAAVRHDTSTSATRLDLSTLQGR
EYNVDGGGALSFLGTGSAIPSKYRNVSGAFVEVVYTSQHREPPCRAIVVLDFGEGSTGQL
SMLYGHGEEQLRDFVRDLTFVFISHSHADHHLGLLSLLELRHRLFFERDANGKQRDEIEP
ILIVCPQEVWAFLMETWGQSRSCGQWLSEEVIFDVFPAEDGEEQLRSDVAFLPHLNELCS
KLCSKMVSSQSDIVSDEAVPRRANRPLWAAEVFPVDHPANAHALLLRFPVHQATPSDLAP
SRVLLFSGDTRPSPFLVERCCQFTDTTCRDSEESQDPIGGVYICLHEATFGDGCEDEAMR
KSHSTLREALGVAGAIGARHVVLNHFSQRYPKLPGLTKAHLGGRDVDLHCKRRGHRPKQT
ERPTLVSEEMEQEPEQPMCFGFDFMRLTFAALERGEVSRLTPLFVQLLQEYESWGVGTTK
RLRE
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagataccattcagcttgtgggtacggatgttccaaacagctacggtagctgc
tgctttaccggccacgtacagcatgaggttttgaactgggttaccgagcccatgccacct
attggtagtgcatcgcaaagcccaaccccggccagtagatgtgagagtcagttacttttc
ttcaactgccctgaaggcacgcagcgctttagtgccgaagcggctatacgtctagtgcgg
acacgtggttttttcttcacacggtgggtgccgtcaaccgtgatgggcatgccaggactg
ctgtttaccattaacgatgctggcgttcaccatgcaaatttctttgggccaggcggaatg
gggatgactggcggaagcgacgaagttcagggcgttggtgacagtgctgccgctgcccag
tcctcaagttgcgggagcgatgtaattggcaactgtactggaggtttggctgaaatgttg
gacgctttgcggcggcactattttgtttaccgacagatgagcttccagcagttacgtgtt
ggccagttgccgcgacgtctttctacgtcaatgccggggaactatgtgtatgaggtgccg
ctgctgtttgatagaagtgaaaccatatctaccgttggtcaggggcggggtcaccgcgta
cccgaggccgctgcgttgtcattgtcgtctttttttgtcatagcgctgcaactgagtacg
acgagtgcattggttggttttcgcatatcgcaaggcaacaagagcgatgcggacgaagtg
tatggctatgccattttgcatgcgccggccgccgtctttgactgccgctgtgcaaaggct
cttggtgttccggcgggtcctttatacggccagttgaagcaaggtgtgggcgtgtgggtg
gatgaccctcctactcccggtgctgaaggcgaatgtaacacgcgccgcttcattgacccc
cgcagtgtacagcaggcaactgtgggtagccaatctctctacgtgacgcttgtgctggat
ggtgacagtgtttgtgatgtggcgaccgctatggaaactctctttggtcgtgacggggcg
ggagccgaggaacgggatttccgccaggaacattcgactgtggatggcggtgattgcagt
actagcggtaaactttatgaacttctcaagcagtggaaaccacagtttgcgtaccgcagc
cacagcgctaacctttgcaaagatgacggaacagcacaagtggagcgtacgatttcgtta
gttcacgtcgttcacgtgcaatgtctgcaattcttttcgtctataggagggggaaaccac
gtcattgggcaatcgctttatatttcgaatgtgtttgcgcatgttttccctcctgtccgt
caagacgctatgaaatgcctttccaacgacgctaacttccctgtggggttggaaccgcca
acagccggtgggacgaaacaccacttttgcgcggatgttcagagcaccttctccgctttc
ccaactgcactcgctcatcgttatcatctgaacagtattgctgcccagcagtttccgcta
gcatcgtcgctgtctgaaaagagcgacagcgaacccagtgaatgttggattaggcattgc
tacgttgatgatggaaaggggcctgtttggccatacgccgtgaaacatctactcattccc
cctggtgccagcactccactggttactgaaataagtgacgacccttctgcagcccatgtt
ctcgttgagaggttggccggcgctaccctttccgcacggagcggactcgaaaattttgac
aaacagaatgttgctggtagagagaagaagggtactaacgtgaaggggttgttgcggtac
ccgactgccacctccgctgctgcaatgctttcggaacagttccgttctgcggttgccgct
gttcgccacgacaccagcacatcagctactagactcgacttgtccacgttgcaaggacga
gaatacaatgtagacggcggaggtgccctctcatttctgggtactggctccgctataccg
agtaaataccgtaacgtcagtggggcatttgtggaggtggtgtacacttcgcaacacagg
gaaccgccgtgccgtgccattgttgtgcttgattttggcgaaggtagcaccgggcagttg
tcgatgctctacggtcatggggaggagcagcttcgtgacttcgtgcgtgacctgaccttt
gtgttcatctcccactcgcatgcggatcatcacttggggttactaagtctgcttgagctt
cgtcaccgtctattttttgagcgggatgctaacggaaagcagcgtgacgagatcgaacct
attctcattgtttgcccccaagaggtttgggccttccttatggagacttgggggcagtct
cgttcctgcgggcagtggttgagtgaggaagtgatatttgatgtcttccccgcagaggac
ggcgaggaacaacttcgtagcgatgtagcgttcctgccacacctcaacgaactgtgttcg
aaactttgcagcaaaatggtgtcgtcgcaatcagatattgtgagtgatgaagccgtgccc
cgcagagcaaatcgaccgctctgggctgccgaggtgtttccggtggaccacccagcgaac
gcccacgcgctgctccttcgatttcccgttcaccaggctactccttcagatttagcacca
tctcgtgttttgctcttctcaggggacacgcgaccctccccgtttctcgtggagcgctgt
tgtcagtttacagacaccacttgccgcgattcagaggagtcgcaggacccgattgggggt
gtttacatttgcctgcacgaagccactttcggtgatggctgcgaggacgaagcgatgcga
aagtctcattcaaccctccgggaggctcttggcgtggcgggggcaatcggtgcccgacac
gtggtgctgaaccacttttcccagcgatatccgaagttacccggtcttacgaaagcgcat
ctgggtgggcgtgatgtggaccttcactgcaagaggcgcggccaccgccccaagcaaacg
gagaggccaacactggttagtgaagagatggagcaagagcctgagcaacccatgtgcttc
ggctttgacttcatgcgtttaacgtttgccgcacttgagcgtggggaagtctcgcggtta
actcccttgtttgtacaactcctgcaagaatatgaatcatggggtgttggcacaacaaaa
cgactacgtgaatga
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