Trypanosoma brucei gambiense: TbgDal_V5770
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Entry
TbgDal_V5770 CDS
T06526
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_V5770
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TbgDal_V5770
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
90S particles
Helicases
TbgDal_V5770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
23861598
NCBI-ProteinID:
XP_011773724
UniProt:
C9ZPV9
LinkDB
All DBs
Position
5:complement(1221236..1223719)
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AA seq
827 aa
AA seq
DB search
MDERQMEDKRTARKRRWAERQERSRLNRSEGEALRKQRQELRAALDAVDEGKQELVEQIS
YTRFDQLPLSQRTQLGLERGGYKLLTPIQSDALHLALAGYDVLGAARTGSGKTLCFIVPL
LELLYVEQWEAEMGIGALVLSPTRELALQIFKVLQLVGYKHVMSAALLTGGRDVNEERKR
VSAISIIVGTPGRVLHHLEDDDSLVTDNLQMLVMDEADRLLDMGFREVLSGILKQLPTQR
QTLMFSATQTTDVQMLGQMSLRNQRYVSAHAECAAPTPSTLCQNFVVVELHRKLDVLLLF
LKRHPNDKFVVFVSTCNQVRYMYLAFAKILKKMHLPCMCLTSKMKQFRREEVFLTFCRCK
NAVLFCTDVAARGLDFPLIHWSVQFDCPDSAQTYIHRAGRTARAGARGVSLLFLTPREVP
MLSFLAHKHIPLREIAVRPQMLRESKEIFVALVVQGLKYEAQKAFIAYLRSVYFAANKLV
FDVKSIDVAPFAHSLGLMKVPDMSELGNLQRGAKNLPWDVVNFMAKRDAKEVADAKSRRE
RHLTASDMFRTLQQKQRYATTDSTDVDLAADANINGEDEEKNDPFLVKKPHEKGNEDHLD
EGMQLTFTERMAGLSKRKVRKYIESADLRVRDLGLSKRVVYDEDDDAEEDEINMRIANEG
QDIGINVEGGSGSDNDLGDVPEKFAERLRQRVTQDSAADNERAKKLRRLRRLQRSGKISR
KTALEDISAPKGTTDAVDSDDHTDDNSPQQSSNDYDDGDISVHSSDSFTRLIKAAKGELF
SDNEDEDISSSYNGNFETEKKKNEKKKKEKRRKPFKKNNKLSHPTKK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaggcagatggaggataagcgcaccgcgcggaagcggcggtgggcggagaga
caggaacggtctcggttaaatcgatctgagggtgaggcattacgtaaacagcgccaggag
ttgcgtgcggcgctggatgctgtggatgaagggaaacaagaactggtggaacaaatatcg
tacacgcgttttgatcaattgcctctgtcgcagcggacacaacttggcttggagcgtggc
ggatataagctcctgacgccaattcagagtgatgcattacacttagcgcttgcaggctat
gacgtccttggggccgcccgcacaggttctggtaagacattatgttttatagttcctctg
ttagaactcctgtatgtggaacaatgggaggcggagatgggtattggtgcccttgtgctt
agtccaacgcgtgaactggcattgcaaatatttaaggtgctacaacttgtaggttataag
cacgtaatgtccgccgcgcttttgaccggtggtcgcgatgtgaatgaggagcggaagcgt
gtttccgccataagtatcatcgttgggactccgggtcgtgtattacaccaccttgaggat
gacgatagccttgtgactgataatcttcaaatgcttgttatggacgaagctgatcggctg
cttgacatggggttccgcgaggtgctgagtggcattctcaagcaacttccaacgcagcgt
cagactttgatgttctcggcgacacaaacaacggatgtgcaaatgctcgggcagatgtct
ctgcggaatcaacggtacgtgtcggcgcatgctgagtgcgccgccccaaccccatccaca
ctttgtcagaacttcgtcgttgtggaactgcatcgcaagttggacgtactgctgctcttc
ctgaagcgccacccgaatgacaagtttgttgtgttcgtcagtacgtgcaaccaagtgcgg
tacatgtatctcgccttcgctaaaatactgaagaagatgcacctgccatgtatgtgcctt
actagtaaaatgaaacagttccgccgtgaagaggtattcctcacgttctgtcgttgcaag
aatgcggtcctgttttgcaccgatgtcgcagcacgtgggcttgatttcccacttattcac
tggtctgtgcagttcgattgtccagacagcgctcaaacttatattcatcgagcaggtcgt
acggcgcgggcgggtgctcggggcgtcagtctacttttcctaaccccgcgggaggtacca
atgctgtcctttttggcccacaagcacattccactacgggagattgcggtacgtccccaa
atgctccgggaatcgaaggagatatttgttgcactcgtagtacagggcctcaagtatgag
gcccagaaggcatttattgcttatctacgctctgtgtactttgcagcgaataaacttgtt
tttgatgtgaaatctatcgatgtagcaccatttgcccattcccttggtttgatgaaggtt
ccggacatgtcagagttggggaatttgcagcggggagcgaagaatcttccgtgggatgtt
gttaacttcatggcgaaacgtgacgcgaaagaggtagcagatgcaaagtcacgacgtgaa
aggcacttgactgcctccgacatgttccgcacgcttcaacagaaacagcggtatgcaaca
accgacagcacggatgttgatttagctgccgatgcaaacatcaacggagaagacgaagag
aaaaatgacccttttctagtcaaaaagccgcacgaaaaaggcaacgaggatcatctggat
gaagggatgcagttgacatttaccgaacgaatggcagggctttctaaacgcaaggttcgg
aagtatattgagtctgctgaccttcgtgtgcgtgaccttggcctcagtaagagagttgtc
tacgatgaggatgacgatgcggaagaggatgaaatcaatatgcgcatagcaaatgaaggg
caagacatcggtattaatgtcgaaggtggcagtggaagtgataatgaccttggcgacgtg
cccgagaaatttgctgaacggttaagacaacgcgttacacaagactccgctgcagataat
gagcgagcaaagaaacttcgtcgccttcgacgtcttcagcgtagtggaaagatttcacgc
aaaacggctcttgaagacatcagcgcaccaaagggaacaacagatgcagtggacagcgac
gatcatacagatgacaacagccctcaacagagcagcaacgattatgacgatggagacatc
agcgtacacagctctgactccttcacacgtcttatcaaggcagcaaagggagaactattc
tcagacaatgaagatgaagatatcagcagtagctacaacggcaacttcgaaacggaaaag
aagaagaacgaaaaaaagaaaaaagaaaaaagaagaaaaccgtttaaaaaaaataataaa
ttatcccaccccacaaaaaagtaa
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