Trypanosoma brucei gambiense: TbgDal_V5960
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Entry
TbgDal_V5960 CDS
T06526
Name
(RefSeq) nucleolar RNA helicase Gu, putative
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_V5960
03036 Chromosome and associated proteins [BR:
tbg03036
]
TbgDal_V5960
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TbgDal_V5960
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Helicases
TbgDal_V5960
Chromosome and associated proteins [BR:
tbg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
TbgDal_V5960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
Cas3-like_C_2
ERCC3_RAD25_C
ResIII
Astro_VPg
Motif
Other DBs
NCBI-GeneID:
23861619
NCBI-ProteinID:
XP_011773743
UniProt:
C9ZPX8
LinkDB
All DBs
Position
5:complement(1253234..1255132)
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AA seq
632 aa
AA seq
DB search
MSSRAEEGTHRHEGHVTKTKRSREEMTGNEETDQEPNNGSAAVGRPFSEFNLSSGMVKAL
EAQGIVSLFPVQALTFEAIMRGEDVLVQARTGSGKTLAFGIPIVEKLNKKEGPLARGRGP
AAVIFCPTRELAIQVRDVLAGVSGDLVVAALYGGVAYSTQERVLFSGVDIVVATPGRAKD
FLEKGTLHFERVKMVCLDEADHMLDIGFKEDIELLLQRVAEQNGSTPDEPKHQTLLFSAT
VPDWVHTCSFISKNKKFIDMVGQGAMRAANTIRFYRRKCGFAEVSSMLADLVKVYSGRHG
RTLIFTNTKKDCHDLSINNTKLDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARG
LDLPMVDLVIQCAPPTDIDAFIHRAGRTGRAGRKGVCVLLHQPKDEYVVERIERHAKIKF
EVLPAPTREEILKAVARDAAEDMARVERSATNLFMDQAAELLKDADPTEILASAIAVMSG
YTSSITKRGLISGARGSATVQMLGQRSLPTHVFCSILRNNLGDELFMRCRDITLLQDAPG
CVFDVPEDVVDRILNTPVQGMELSVIETLPPIIARELNSGSRGNRGGGGGGGGYRGGPRG
GGYNQYNRNGGGGGGGGGRSWGSGYRSTQRRY
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagagctgaggaagggactcacaggcatgaagggcacgtcaccaaaacgaaa
cgctcccgcgaagagatgactgggaatgaagagactgatcaggagcccaacaacggctct
gccgcggtgggtcggccgttctctgagtttaatctttccagcgggatggtgaaggcactg
gaggctcaaggtattgtttcgctgtttcccgtgcaggcactaacattcgaagctattatg
cgtggtgaagatgtccttgtgcaggcgcgtacgggaagtggcaaaacacttgctttcggt
attcccattgttgagaaactgaacaagaaggagggaccgctggcgcgtgggcgcggtcct
gcggcggtaatattttgcccgactcgtgaacttgccattcaagtgcgtgacgtgctcgca
ggtgttagcggggacctcgtggttgctgcactttatggtggtgttgcctacagtacccag
gagcgtgtgctgttcagcggtgttgacattgttgtggccacacccggtcgtgcaaaggat
ttcctcgagaaaggtacgctgcactttgagcgtgtgaagatggtttgtttggacgaggct
gaccacatgctggatattggcttcaaggaggatattgaactgttactacagcgagtcgca
gaacagaacggttcgactcctgatgaaccaaaacaccagacgttgctcttttcggccacg
gtcccagactgggtccacacgtgctcattcatttccaagaacaaaaagtttattgatatg
gtcgggcaaggcgcaatgcgtgcggcaaacaccatccgattctatcgccgtaagtgtggc
tttgctgaggtttccagcatgttggcagacttagtgaaggtgtacagtgggcggcatggc
cggacactcatttttaccaacaccaagaaggactgccatgacctttccatcaacaataca
aagttggattctcagtgccttcacggtgatatgcaacaagagcagcgggagagcacgatg
aaaagcttccgtgacaacaagtttagcgttctgatagccactgatgtggctgcccgtggc
ttggatctccccatggtggaccttgtcattcagtgcgcaccgcctacagacattgatgcc
tttattcaccgcgctggcaggacaggacgtgctggccgcaaaggtgtctgtgtgctcctt
caccagccgaaggatgaatatgttgtggagcgcattgagcgccacgccaaaattaagttc
gaggttttacccgcgccgacgcgggaggagattcttaaggcagtggcgcgcgatgctgcg
gaagacatggcacgcgtggagcgaagcgcgacaaatctttttatggaccaggctgcagaa
cttcttaaggatgctgacccaaccgagattcttgcttcagctattgccgtcatgagtgga
tataccagcagtatcacaaagcgtggcctcatcagcggggcaaggggctccgcaacagtg
cagatgttgggtcagcggagtttacctacgcatgtgttttgcagcatattgcgcaacaac
ctcggggatgaattgtttatgcgttgccgcgatataacactcctgcaggacgctccgggt
tgtgtatttgacgtgcctgaggatgtagtggaccgcatactaaacactccagtgcaaggc
atggaattgagcgtaatcgaaacgcttcctccaattattgcccgagagctgaacagcggt
agtcgcggaaaccgtggtggaggtggtggtggtggcgggtaccgtggcgggccacggggc
ggcggatataatcaatacaaccgtaatggtggcggcggcggtggtggcggcggaaggagt
tggggttccggctaccggtcgactcaaaggcgttattag
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