Trypanosoma brucei gambiense: TbgDal_VI1450
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Entry
TbgDal_VI1450 CDS
T06526
Name
(RefSeq) KU80 protein, putative
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TbgDal_VI1450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_VI1450
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
TbgDal_VI1450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
VWA
Motif
Other DBs
NCBI-GeneID:
23861778
NCBI-ProteinID:
XP_011773952
UniProt:
C9ZQI7
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Position
6:complement(362118..364022)
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AA seq
634 aa
AA seq
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MAFRTSTIFALDVNCSISSLAQAVEFCRLSVLKTMCPSSYDEVALVVAGGCRSYSGGTST
SISTCGSAAQLSAPCLPAPPSVEFITILHRILRDREEQQGVGSSANFIETLTLCVEVFNL
KKRRKQFREVLYLLTDAHAEVVRKSVFRDVLNALRARGVTLIVVGIDFSQVTGEGSLLPG
ESAPSLTSNRVKVDNETVLYTLCKALGNDSRVITLRDALVSAAQLVCRKVRSLAQKTVFT
IGEVRLATNVLGKVRRMHVPANRTPAPTERVPGSRKAAHSQLFDEETLRLEGGEEDSQKT
CLETPVNKPTASSSNRLSEATKIRGSRGIDAVACIPQNQVPVHVLVVDTSYMIAPLDDDP
VGTRAFRSIVKALAAQDSALVVRYVRSTDGNPNMFLCVPLTTGDEDVLFMSRLPFMEEIR
CLRFPTLQEMEMECDIPEADAQREQELVSSIVEEMTVGEEVLHPHRVLNPFVQQYYATQR
AMVNRWCSRTAENPLSAHEDSDIKLALLPQLRGISAGFASPGCKVEQLVSRTREKLETCC
RVFAYVPRTTSHSPERKVLWERIPAGQPPVSETVENTEVASPAAPSTLQCHLGSGSSVTC
RPVCANPPHDVVSFIQDKRTMFHPVAHPLGSGSS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctttccgtacctcaactattttcgccctagacgtaaactgctcgatttcttcactt
gcgcaggctgtggagttctgtcgcctttccgtactgaagaccatgtgcccttcttcatat
gatgaggtcgctttggttgtggctggtggttgcagaagctacagcgggggcacatcaacg
agtattagtacttgtgggagcgcagctcagctttccgccccatgtttgccggctccacca
tctgttgagttcatcacaatactgcaccgaatcctgcgtgaccgggaggagcaacaaggt
gtgggatccagtgcaaatttcattgaaactcttactctatgtgtagaggtgtttaacttg
aagaaacgaagaaagcaattcagggaggttttgtatctcttaacggatgcgcatgctgag
gtggtcaggaagagcgtcttccgcgatgtgctgaacgctctgcgagcgcggggtgtgaca
cttattgttgtggggattgatttctcccaagtgacaggtgaaggttccctgcttcccggt
gaatcagccccatcactcactagtaaccgtgtgaaggttgataatgaaactgtactgtac
accttgtgtaaggctttgggtaacgacagtcgagtaataacattacgtgatgccctggtg
agcgctgcgcagttggtgtgccgaaaagtacgcagccttgcacaaaagacggtattcaca
atcggtgaagtgcgcttagctacgaacgtgctcggtaaagtgagacgaatgcatgtacca
gcaaatcggacaccagcaccgactgagcgagtgccagggagtagaaaggcagctcactcg
cagctgtttgacgaagaaactctccgattagaaggcggggaagaggacagtcagaaaacg
tgcctggagactcccgtaaacaaaccgaccgcctccagcagcaatcgcctctctgaagct
acaaagatacgcgggtcacggggtattgatgctgttgcttgcattccacaaaaccaggtt
cctgttcatgtgctggtggtcgatacatcgtacatgatagcaccgctagatgatgacccc
gttgggacgagggcgttccgaagcattgtaaaggcgctggcagctcaagattcagccttg
gtggtgcgttatgtccgatcgactgatggaaaccccaacatgttcctctgcgtgccgtta
acgacaggtgacgaagatgtacttttcatgtccagattacctttcatggaagagatccgc
tgtctgcgctttcccactctacaagagatggaaatggaatgcgacattccggaggccgat
gcacagagagaacaggagcttgtttcatcaattgtagaggaaatgacggtaggtgaagag
gtgcttcatccacatagagtgcttaatcccttcgtgcagcaatactacgccacgcagcgc
gctatggtgaaccgctggtgttcccgaacggcggaaaaccctctcagcgcccatgaggat
tccgatataaaactcgcacttctcccacaactgaggggaatttccgcagggttcgcctcg
ccaggatgcaaagtcgagcaacttgtttctcgtacccgtgagaagcttgaaacgtgttgt
cgcgttttcgcgtatgtaccgaggacgaccagtcattctccagagcgcaaagttctatgg
gagcgcattccagctgggcaaccgccggtatctgaaacagttgaaaatacggaagtggca
tcacctgcggctccttctactctgcagtgtcacttgggaagcggatcctccgttacatgc
cggcctgtttgtgctaatccaccacatgatgtggttagtttcatacaagacaagagaact
atgtttcatcctgtcgcacaccctctggggagcggctcgtcgtaa
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